AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g13050 ATGGAAAAAAAACCATTAGTGGCCCTACTTTCATCCATTATTTCAGACCTCCTTCTCACCATAACCGCCGCCATCTCCCCTCCAGCCGCCAGCCCAACTTGTTCTCCAATCACACACTTCTCCAACTTTCTCACAGTCTCCCACACAGCCGCAACAATCTCACTTTTTTCTAAAAAAAGAAAAAAGCCCGAAGAATCACCTCAACCTAAACACGACCCGCCTACCAAAATACCCCGAAACCTAGATACTTTTAAATTATATTTTAAAATGAATTCTACGACATTCGAGTGGCTAGCGGCTCTTCTGGAGCCGCTGCTCGAGTGTCGTGACCCGGTTGGCTCATCTTTAAATTTAAAGGTTGAGACAAGGATGGGTATTGGTTTGTTTAGGCTCGCCACGGGTTCTGACTATGTTGAGGTTGGTAGAAGGTTTGAGGTGTCAGAACCCGTGGCGAGGTTTTGTGTTAATCAGTTTTGTAGGGTTTTGTGTACTAATTTTAGGTTCTGGGTCGGGTTTCCGACCCAGAATGAGCTTGGCACGGTTAGTGAGTCGTTTGAAGCGTTAACCGGGTTGCCTAATTGTTGTGGAGTTATACAGTTTACAACATTTGACATTTCAAAAAATGGGACAAGTCAACATGTAGCTGCCCAAATTGTGGTTGATGCATCATCAAAGATTTTAAGCATTGTGGCTGGATTTAATGGTAACAAGAGTAACCAATACGTTCTAAAAGCGTCAAGTTTATATAACGATATTGTATCGAATAATCTGTTAAACTCGAAGCCTATAGATATAAATGGTGTGTTTGTACCTCAATACTTAATAGGTGAAAAAGGGTATCCTTTTCTTCAATGGTTAATGGTTCCATTTGATCAACCTGTTGTTGGGAACTCGTGTGAAGAAAACTTTAATTCAGTGCATAATCTAATGATGGGTTTTGGGTATAGGACAGTTGATAGTTTAAAGAAATGGGGCGTTTTGAGTAAGCCAGTCAATGAAGAGATAAAGACTATGGTGGGTTATATTGGTGCTTGTTCGATACTTCATAATGCGTTGCTTATGAGGGAAGATAATTCTTCGTTGTCTGAGAAGTTTGATGAATACAAAAATTCACGATATTGTATGGATGACGGTTTTGGTGATGATTTAGTTGATAAAAAGGCGGTTGAGATTAGAAGTGCATTAGCTACAAGAGCAAGAAAATGTGTATAG 1212 40.18 MEKKPLVALLSSIISDLLLTITAAISPPAASPTCSPITHFSNFLTVSHTAATISLFSKKRKKPEESPQPKHDPPTKIPRNLDTFKLYFKMNSTTFEWLAALLEPLLECRDPVGSSLNLKVETRMGIGLFRLATGSDYVEVGRRFEVSEPVARFCVNQFCRVLCTNFRFWVGFPTQNELGTVSESFEALTGLPNCCGVIQFTTFDISKNGTSQHVAAQIVVDASSKILSIVAGFNGNKSNQYVLKASSLYNDIVSNNLLNSKPIDINGVFVPQYLIGEKGYPFLQWLMVPFDQPVVGNSCEENFNSVHNLMMGFGYRTVDSLKKWGVLSKPVNEEIKTMVGYIGACSILHNALLMREDNSSLSEKFDEYKNSRYCMDDGFGDDLVDKKAVEIRSALATRARKCV* 404
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g13050 403 PANTHER UNCHARACTERIZED 79 396 - -
Artr3g13050 403 Pfam DDE superfamily endonuclease 213 350 IPR027806 -
Artr3g13050 403 MobiDBLite consensus disorder prediction 57 77 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g13050 K23222 nuclease HARBI1 [EC:3.1.-.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:451128129 Artr3g13050 Artr-Chr3:451156509 proximal