AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr9g04530 ATGAAAGAAAATGGGTCATCATCATCATCATTATCATCAGGGGATATAATCGAGCACAAAGCGTACGCTCGGATCGGACTAATCGGTAACCCCAGCGATGTGTACTATGGGCGTACAATTTCAGTAAACATCGAGAATTTTAATGCTAGTGTTCTTCTAGAACCTTCTTCAGATCTGTTTATTCATCCTCATCATACTCATGACCTTGTTAAATTCTCTTCACTTAATCATCTGGTGAATCGGTTGGAAAATGAAGGTTACTATGGAGGAGTGCGATTGCTCATGGCAACTTGTAAAGTTTTTACCAAATACTGTAAAGAACAGGGGATTCTTCTTCATGACAAGAACTTTTCCCTTTCTTATGAAACCAACATCCCTCGTCAGACCGGGCTATCGGGTTCTAGTGCCATTGCATGTGCTGCTTTTAGCTGCCTTCTTGACTTCTACAATGTCCGAGATAAGATAGCTGTGGAGATAAGGCCGCAACTTATCTTGAATGCGGAAAAGGAACTTGGAATTGTTGCTGGTCTACAGGACAGAGTAGCTCAAGTTTATGGGGGACTTGTGTACATGGATTTTGACAAGGAGCACATGCATAAACATGGTCATGGTAAATACACACAGTTAAATTCAAGTCTTCTTCCTCCTCTTCATCTCATTTATGCTGAAAATCCAAGTGATTCTGGGAAGGTACATAGTTCAGTTCGACAAAGATGGTTAGACGGAGATGAGTTCATAATATCATCAATGGAACAAGTCGCCAACTTAGCTCTTGAAGGAAAAACAGCAATACTTGAAAAGGACTATGCTAAACTTGCAGACCTTATGAATAAAAACTTCGATTTACGAAGGCAGATGTTTGGTGATGCCGCCCTTGGGGCTCTAAACATAGAGATGGTGGAAGTGGCCAGAAGTGTTGGTGCGGCGTCAAAGTTTACAGGCAGTGGAGGAGCGGTGGTTGCCTATTGCCCTGATGGACCGTCACAAGTTGAACTATTAGAGGATGCTTGTAAGAAGAGTGGATTCTCCATTGTACCTGTGAAAGTTGTACCTTCGCTTCTCAATGAATTCGATATCAGAGCTCTATCATCAACAACAGAAGCATAG 1107 41.92 MKENGSSSSSLSSGDIIEHKAYARIGLIGNPSDVYYGRTISVNIENFNASVLLEPSSDLFIHPHHTHDLVKFSSLNHLVNRLENEGYYGGVRLLMATCKVFTKYCKEQGILLHDKNFSLSYETNIPRQTGLSGSSAIACAAFSCLLDFYNVRDKIAVEIRPQLILNAEKELGIVAGLQDRVAQVYGGLVYMDFDKEHMHKHGHGKYTQLNSSLLPPLHLIYAENPSDSGKVHSSVRQRWLDGDEFIISSMEQVANLALEGKTAILEKDYAKLADLMNKNFDLRRQMFGDAALGALNIEMVEVARSVGAASKFTGSGGAVVAYCPDGPSQVELLEDACKKSGFSIVPVKVVPSLLNEFDIRALSSTTEA* 369
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr9g04530 368 PRINTS Mevalonate kinase family signature 21 45 - -
Artr9g04530 368 PRINTS Mevalonate kinase family signature 167 186 - -
Artr9g04530 368 PRINTS Mevalonate kinase family signature 307 324 - -
Artr9g04530 368 PRINTS Mevalonate kinase family signature 123 145 - -
Artr9g04530 368 SUPERFAMILY Ribosomal protein S5 domain 2-like 17 201 IPR020568 -
Artr9g04530 368 Gene3D - 15 365 - -
Artr9g04530 368 Pfam GHMP kinases N terminal domain 119 187 IPR006204 GO:0005524(InterPro)
Artr9g04530 368 FunFam Probable glucuronokinase 2 16 357 - -
Artr9g04530 368 Pfam GHMP kinases C terminal 263 337 IPR013750 -
Artr9g04530 368 SUPERFAMILY GHMP Kinase, C-terminal domain 211 348 IPR036554 -
Artr9g04530 368 PANTHER WITH PUTATIVE URIDYL PYROPHOSPHORYLASE-RELATED 13 354 IPR053034 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr9g04530 K16190 glucuronokinase [EC:2.7.1.43]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr9:181127436 Artr9g04531 Artr-Chr9:181132133 tandem