AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr9g04661 ATGCCTTCATTAATCCCAGAAGAACCACTTTTAACACCAACCCAAGACAGATTCTGCATGTTCCCAATTCACTACCCTCAAATATGGGAAATGTACAAAAAAGCCCAAGCTTCATTCTGGACAGCAGAAGAAGTGGACTTATCATCAGATATCTGTCACTGGGAGTCGTTAACTAACGGAGAACGTCATTTCATTACACACGTTCTCGCGTTTTTTGCTTCTTCTGACGGCATTGTGTTGGAGAATTTGGCTAGTAGGTTTATGGGTGATGTCCAAGTGGCCGAAGCGAGGGCTTTTTACGGGTTTCAAATTGCGATAGAGAATATACATTCGGAGATGTATAGTTTGCTTTTGGAAACGTATGTGAAAGATGGGAAGGAGAAAGATAGGTTGTTTAGGGCTGTTGAGACGATCCCGTGTGTTGAGAAAAAGGCGAAGTGGGTGATGAAGTGGATTGAGGGCTCGGAGTCGTTTGCTGAAAGAATTATTGCGTTTGCGTGTGTTGAAGGTATATTCTTTTCAGGAAGCTTTTGTGCGATATTTTGGTTAAAAAAGCGCGGGTTAATGCCAGGACTAACCTTCTCCAACGAGTTAATCTCACGAGATGAAGGCCTGCACTGCGATTTCGCCTGCCTACTCTACACTTTACTAAACAACAAACTAACCGAAGAACGCATAAAATCCATAGTATCTGACGCAGTTGATATCGAACGTGAGTTTGTTTGTGACGCATTACCATGTGCACTAGTTGGCATGAATGGTGAACTCATGAGTACGTATATCGAGTTTGTGGCTGATAGGTTGTTGGCATCTTTAGGATTTAGCAAAATGTATAATGTTTTGAACCCGTTTGATTGGATGGAATTGATTTCGTTACAAGGGAAGACGAATTTTTTTGAGAAGCGAGTAGGGGAGTATCAAAAGGCTTCGATTATGTCGAATTTGAATGGAAATGGTGGTGATCATGTGTTCAAGATGGATGAAGATTTTTGA 993 41.59 MPSLIPEEPLLTPTQDRFCMFPIHYPQIWEMYKKAQASFWTAEEVDLSSDICHWESLTNGERHFITHVLAFFASSDGIVLENLASRFMGDVQVAEARAFYGFQIAIENIHSEMYSLLLETYVKDGKEKDRLFRAVETIPCVEKKAKWVMKWIEGSESFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLTEERIKSIVSDAVDIEREFVCDALPCALVGMNGELMSTYIEFVADRLLASLGFSKMYNVLNPFDWMELISLQGKTNFFEKRVGEYQKASIMSNLNGNGGDHVFKMDEDF* 331
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr9g04661 330 ProSitePatterns Ribonucleotide reductase small subunit signature. 106 122 IPR030475 -
Artr9g04661 330 CDD RNRR2 18 292 IPR033909 GO:0009263(InterPro)
Artr9g04661 330 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 8 330 IPR000358 GO:0009263(InterPro)
Artr9g04661 330 PIRSF NrdB 6 317 IPR000358 GO:0009263(InterPro)
Artr9g04661 330 Gene3D Ribonucleotide Reductase, subunit A 4 308 IPR012348 GO:0016491(InterPro)
Artr9g04661 330 Pfam Ribonucleotide reductase, small chain 17 283 IPR000358 GO:0009263(InterPro)
Artr9g04661 330 SUPERFAMILY Ferritin-like 6 308 IPR009078 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr9g04661 K10808 ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
Artr9g04661 K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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Event-related genes

Select Gene_1 Gene_2 Event_name
23232 Artr7g07583 Artr9g04661
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr2:103438402 Artr9g04661 Artr-Chr9:184739490 transposed
Artr Artr-Chr7:273953419 Artr9g04661 Artr-Chr9:184739490 wgd