Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01071 | ATGCCGGCTCAAAAGCGTTCGTACGACGAAGAGGAGCCGCAACGTAACAACAATCACAGCGAACCCGAAGAAGATGAAGACGTTGAACAAGGTTCGTCTTTAGTTATCATTGCTGCTCATTTCATCACACTTGTACGGAATAATTCGGAAAACCAGGACGGTCATGGAATGCCTGCACCGCTTTTGCAGGGAATGCATAGACAAATCAATGAGATTGGGGAATGCCCTGCTTGTCGTGCTCATTGTGCAAGTCGACGCTCTTTGAGGGATGACCCTAATTATGATGCCCTAATTGCAGTTCTGTACCCTGACATTGATACATTTGAAGCAGAGGAGTTTGCATTTGAAGAAGAGGAGAAAGCTCGGAATAAGCAGATTCAAGCTTCGATTGCTCAGACATCTCAGCGTCAACTAGAAGCATTGGGAAAGAAACGCACAACTGCTAAAGCGACAACTGCAGTATTCACAAGAAGATCACAGGCAAACACGAGGAATTTAAGGGGAAGACGTAGGAAATCATTTGAACCACAAGAATCTGAGAATGAAGATGATGATGTCACCAATGATGTAGACAAAGATTCATCTTCTAGTGATGAACATGAACATGAAGTAAGACCTAGAAGACAAAAAAGATGGAGGCGATCTTCACTACCATCAAGTAGTGCTGATGGTGATGACAATGACGTTGAAACACCCAATAGGGAAGTGACAGGTGTACCTATTGGTACTTCAGAAATTTTAACATGGGGTCGAGGTGGCATTAGAAGCCACACACGACATGGTAGCAATAGTGCCAGCAAGAGTTCAAGGAACACTCGGGTTTCTAGGCTCATGGATCATATTAAGAAATTACCACAAAATAATCATAAGTATGTTGCTCTTGAGAAAGGTTTGCAAGATGACGAGGTTGAAGTGCTTGTGGTGAAAGGGGATCATTTTGAAGTCAATTCATCAACGTCTTTAAAGCCTGAGCCTGTTGTTATAAATCCTTTGACGGATCAGTTGCAATTTCTGGAAGAGCAACAAACTTTGTTGGATGTTGCTAAAAGTTCTGCTCAGGAGGATCTGGTAAGCTCTCTTTAA | 1083 | 42.75 | MPAQKRSYDEEEPQRNNNHSEPEEDEDVEQGSSLVIIAAHFITLVRNNSENQDGHGMPAPLLQGMHRQINEIGECPACRAHCASRRSLRDDPNYDALIAVLYPDIDTFEAEEFAFEEEEKARNKQIQASIAQTSQRQLEALGKKRTTAKATTAVFTRRSQANTRNLRGRRRKSFEPQESENEDDDVTNDVDKDSSSSDEHEHEVRPRRQKRWRRSSLPSSSADGDDNDVETPNREVTGVPIGTSEILTWGRGGIRSHTRHGSNSASKSSRNTRVSRLMDHIKKLPQNNHKYVALEKGLQDDEVEVLVVKGDHFEVNSSTSLKPEPVVINPLTDQLQFLEEQQTLLDVAKSSAQEDLVSSL | 360 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01071 | 360 | PANTHER | OS11G0578200 PROTEIN | 74 | 290 | IPR044592 | - | |
| Bial10g01071 | 360 | MobiDBLite | consensus disorder prediction | 257 | 272 | - | - | |
| Bial10g01071 | 360 | MobiDBLite | consensus disorder prediction | 190 | 206 | - | - | |
| Bial10g01071 | 360 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Bial10g01071 | 360 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Bial10g01071 | 360 | MobiDBLite | consensus disorder prediction | 138 | 273 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01071 | K10695 | E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 182145 | Bial10g01071 | Bial22g00712 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:10898697 | Bial14g02031 | Bial-Chr14:53153719 | dispersed | |
| Bial | Bial-Chr10:10898697 | Bial16g00171 | Bial-Chr16:1651182 | wgd | |
| Bial | Bial-Chr10:10898697 | Bial22g00712 | Bial-Chr22:6890437 | wgd |