AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01071 ATGCCGGCTCAAAAGCGTTCGTACGACGAAGAGGAGCCGCAACGTAACAACAATCACAGCGAACCCGAAGAAGATGAAGACGTTGAACAAGGTTCGTCTTTAGTTATCATTGCTGCTCATTTCATCACACTTGTACGGAATAATTCGGAAAACCAGGACGGTCATGGAATGCCTGCACCGCTTTTGCAGGGAATGCATAGACAAATCAATGAGATTGGGGAATGCCCTGCTTGTCGTGCTCATTGTGCAAGTCGACGCTCTTTGAGGGATGACCCTAATTATGATGCCCTAATTGCAGTTCTGTACCCTGACATTGATACATTTGAAGCAGAGGAGTTTGCATTTGAAGAAGAGGAGAAAGCTCGGAATAAGCAGATTCAAGCTTCGATTGCTCAGACATCTCAGCGTCAACTAGAAGCATTGGGAAAGAAACGCACAACTGCTAAAGCGACAACTGCAGTATTCACAAGAAGATCACAGGCAAACACGAGGAATTTAAGGGGAAGACGTAGGAAATCATTTGAACCACAAGAATCTGAGAATGAAGATGATGATGTCACCAATGATGTAGACAAAGATTCATCTTCTAGTGATGAACATGAACATGAAGTAAGACCTAGAAGACAAAAAAGATGGAGGCGATCTTCACTACCATCAAGTAGTGCTGATGGTGATGACAATGACGTTGAAACACCCAATAGGGAAGTGACAGGTGTACCTATTGGTACTTCAGAAATTTTAACATGGGGTCGAGGTGGCATTAGAAGCCACACACGACATGGTAGCAATAGTGCCAGCAAGAGTTCAAGGAACACTCGGGTTTCTAGGCTCATGGATCATATTAAGAAATTACCACAAAATAATCATAAGTATGTTGCTCTTGAGAAAGGTTTGCAAGATGACGAGGTTGAAGTGCTTGTGGTGAAAGGGGATCATTTTGAAGTCAATTCATCAACGTCTTTAAAGCCTGAGCCTGTTGTTATAAATCCTTTGACGGATCAGTTGCAATTTCTGGAAGAGCAACAAACTTTGTTGGATGTTGCTAAAAGTTCTGCTCAGGAGGATCTGGTAAGCTCTCTTTAA 1083 42.75 MPAQKRSYDEEEPQRNNNHSEPEEDEDVEQGSSLVIIAAHFITLVRNNSENQDGHGMPAPLLQGMHRQINEIGECPACRAHCASRRSLRDDPNYDALIAVLYPDIDTFEAEEFAFEEEEKARNKQIQASIAQTSQRQLEALGKKRTTAKATTAVFTRRSQANTRNLRGRRRKSFEPQESENEDDDVTNDVDKDSSSSDEHEHEVRPRRQKRWRRSSLPSSSADGDDNDVETPNREVTGVPIGTSEILTWGRGGIRSHTRHGSNSASKSSRNTRVSRLMDHIKKLPQNNHKYVALEKGLQDDEVEVLVVKGDHFEVNSSTSLKPEPVVINPLTDQLQFLEEQQTLLDVAKSSAQEDLVSSL 360
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01071 360 PANTHER OS11G0578200 PROTEIN 74 290 IPR044592 -
Bial10g01071 360 MobiDBLite consensus disorder prediction 257 272 - -
Bial10g01071 360 MobiDBLite consensus disorder prediction 190 206 - -
Bial10g01071 360 MobiDBLite consensus disorder prediction 1 22 - -
Bial10g01071 360 MobiDBLite consensus disorder prediction 1 30 - -
Bial10g01071 360 MobiDBLite consensus disorder prediction 138 273 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01071 K10695 E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
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Event-related genes

Select Gene_1 Gene_2 Event_name
182145 Bial10g01071 Bial22g00712
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:10898697 Bial14g02031 Bial-Chr14:53153719 dispersed
Bial Bial-Chr10:10898697 Bial16g00171 Bial-Chr16:1651182 wgd
Bial Bial-Chr10:10898697 Bial22g00712 Bial-Chr22:6890437 wgd