AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01091 ATGGATTTTAGTAAATTAGACCGCGAAGAACTCACACTGTTGGGGGCCGGTGCTTGCACTATGCTAGCTCTTCATTTCTCATCTCAACTTGCTTCACAACATCTTTATTACTGGAAAAACCCAAAACAACAAAGAGCTATTATGATAGTTGTTCTTATGGTACCGGTTTATGCGGTCACTGCTTTTGTGGGTGTGTTGGATCTCAAGAGTAGCAAACCGATTCTCGTGCTTTTGGATTTGATTAAGGATTGTTACGAGGCGCTGGTTGTTGCTAAGTTTCTTACTTTATTGTATGGGTATGTGAATATGGATATTAGTAAAGATACAGTCCCTGATGAAGTTAAGGGAAGAGAAATTCGTCTTGGGTTCCCGATGTCTCTTTTCCAACCTCGTATAGCTCATCTTAATCAGCAAACATTGAAGCTTCTGAAGTACTGCACCTTGCAGTTTGGTGTCATACGACCCATATGCTCATTTTTAATGATCAGTTTACGGTTACTTGGGATGTATCCTGGCTGGGTCAGCTTGACATTCACAATTATTCTAAACATTTCGTTTTACACGGCTATGTATTCTTTACTAGTCTTTTACAACGTTTTTGCAAAGGAATTGAAGCCTCATAAGCCACTAGCCAAATTCTCATGTGTCCTTGGGATCATCTTCTTGTGCTTTTGGCAGGGAGTATTCATCGACATCCTAGTGAAAGCAGGTGTCATAAAATCACATCATTTCTGGATGAAAGTTGAGAATGTTGGAGAAACAATTCAAAATGTTGCAATAATCATTGAGATGATTGGATATTCGGTTTTCCAACAATACGCTTTTCACTTTGAACCGTATAGTGGAGATGTCCAGGCGATGCTGCAAACGGGGAAAAGGAACGAGTGA 888 39.98 MDFSKLDREELTLLGAGACTMLALHFSSQLASQHLYYWKNPKQQRAIMIVVLMVPVYAVTAFVGVLDLKSSKPILVLLDLIKDCYEALVVAKFLTLLYGYVNMDISKDTVPDEVKGREIRLGFPMSLFQPRIAHLNQQTLKLLKYCTLQFGVIRPICSFLMISLRLLGMYPGWVSLTFTIILNISFYTAMYSLLVFYNVFAKELKPHKPLAKFSCVLGIIFLCFWQGVFIDILVKAGVIKSHHFWMKVENVGETIQNVAIIIEMIGYSVFQQYAFHFEPYSGDVQAMLQTGKRNE 295
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01091 295 SMART Solute-trans-a-2 12 280 IPR005178 -
Bial10g01091 295 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 11 285 IPR005178 GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER)
Bial10g01091 295 Pfam Organic solute transporter Ostalpha 14 280 IPR005178 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01091 K14360 organic solute transporter subunit alpha
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:11010395 Bial16g02645 Bial-Chr16:68464692 dispersed
Bial Bial-Chr10:11010395 Bial4g03246 Bial-Chr4:74408206 transposed