AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01240 ATGGAAGCACTCGATTCGGACCACAATGTCGGTGAGGTCGACACGTCAGCGCCGTTTGAATCGGTCAAGGAAGCCGTGAGCCTCTTCGGTGGAGTCGGCTTCTGGAAACCGCATAATAATAATAATAATAATATTAATAAGCAGCACCACCATCATGCTTCTCAGAATGAAGTTGAAGAAGAATTTGATGCTGCAAAAGCGGAAGAGCAAGCCACACAGTTAGCAAACGATCTTGTTGTAAAAGAAAGGGAAACACTTGATGTCTTGAAAGAACTCGAAGCTACAAAAACCACCATTGAAGAGTTAAAACTCAAACTGCAGACAGAATCCATTACAGTCAACCCAATAATCAACGATCAGGCACCAACAGAGGGAAATGACCAAAATACCCTTGACCCGAACCAGAAATCACCAAGTGACAGCTTAATGTGTCCATCATCATCTCCAGGTTTAATATTAATGGAACTGAAGCAAGCTAAACTGAACTTAACAAGAACAACAAGTGATCTTGCTGACATCAGATCGACCGTTGAAACGTTTAAAACAATGATCGAGAAAGAAAGATTGGAACTCGAGAAAACCCGTCAAAGATTATCTTCAAATTGTTTGAAAGTTTCACCTTTTGAAGAAACCGTTGACTTTCCAAGCGAGATTCAAAGGTTGACTTATGAAACGGAGGAGTTTAAGAAAGTTGGAGAGGTGGCAAAATCTGAAGTTTTAGACGCGGTGAGTCAAATTGAACAAACGAAGATGAATATAAAAACAACTGAAATTCGTTTAATTGCAGCTAGAAAGTTGAAGGAAGCTGCGAGAGCGAGTGAAGCGCTTGCACGAGCCGAAATAAACTCAATGTCAAAAAGTCAAACTTTGACCGAACACGAAGGCGTTACGCTTTCTTTTGAAGAATACTCGTGTTTAAAACGGAAAGCTCAAGAGGCAGATGAAGCTTTAGTTAGAAAAGTCAATGAGTCAATGGTCAAAGTCAACGAATCTGAGTTGTCAAAGTCCGAAATGTTAACTAGGGTAGAGGAAGCAATGGAAGAAGTGAAGAACAGTAAGAAGGTTTTAGAAGACGCTTTGAGCAAAGCAGAAAGTGCCAATAAGGAGAAACTGAAAGCCGAAGAAGCTTTAAGAAAATGGCGGTCGGATCATGGTCAAAGGAGAAAGTCAACCGTTCAAAACTCGACCAAGTTCAAGAATGTTTCATGTAGGACCAACAACACTTGTTTGTTGGACGTAAATGGGGCCCACTTGGGAAGTAATACACCTGGCCCGGTTTTGGGGCCCACGTTGTCAATCGGGCAGATTTTGAGCCGGAAGTTGCTTTTGACCGAAGAGTATTCTGGCAAAACCGAGGCAAAAAGGAAGGTTTCTTTGGCACAAATGTTGAGTAAGCCTGGTGGTGGTGGTGGTGGCGGTGACACTGACAATGGTGTGGGTGGGAAACGACGGTCAGGGAAGAGGAAGAAGTTTGGGTTCGGTAGGATTTCGTTTTTGGTGACGAAGCCGAGCAAGAAGAAGAAGAAACATAGTGTAAGTTCAAGACTTTCATGTGCCACTGACTGA 1566 42.59 MEALDSDHNVGEVDTSAPFESVKEAVSLFGGVGFWKPHNNNNNNINKQHHHHASQNEVEEEFDAAKAEEQATQLANDLVVKERETLDVLKELEATKTTIEELKLKLQTESITVNPIINDQAPTEGNDQNTLDPNQKSPSDSLMCPSSSPGLILMELKQAKLNLTRTTSDLADIRSTVETFKTMIEKERLELEKTRQRLSSNCLKVSPFEETVDFPSEIQRLTYETEEFKKVGEVAKSEVLDAVSQIEQTKMNIKTTEIRLIAARKLKEAARASEALARAEINSMSKSQTLTEHEGVTLSFEEYSCLKRKAQEADEALVRKVNESMVKVNESELSKSEMLTRVEEAMEEVKNSKKVLEDALSKAESANKEKLKAEEALRKWRSDHGQRRKSTVQNSTKFKNVSCRTNNTCLLDVNGAHLGSNTPGPVLGPTLSIGQILSRKLLLTEEYSGKTEAKRKVSLAQMLSKPGGGGGGGDTDNGVGGKRRSGKRKKFGFGRISFLVTKPSKKKKKHSVSSRLSCATD 521
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01240 521 Coils Coil 177 201 - -
Bial10g01240 521 MobiDBLite consensus disorder prediction 502 521 - -
Bial10g01240 521 Coils Coil 64 84 - -
Bial10g01240 521 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 11 110 - GO:0005829(PANTHER)|GO:0009903(PANTHER)|GO:0009904(PANTHER)
Bial10g01240 521 Pfam Weak chloroplast movement under blue light 12 107 IPR008545 -
Bial10g01240 521 Pfam Weak chloroplast movement under blue light 209 387 IPR008545 -
Bial10g01240 521 Coils Coil 339 383 - -
Bial10g01240 521 Coils Coil 262 282 - -
Bial10g01240 521 MobiDBLite consensus disorder prediction 462 494 - -
Bial10g01240 521 Coils Coil 89 109 - -
Bial10g01240 521 MobiDBLite consensus disorder prediction 115 146 - -
Bial10g01240 521 MobiDBLite consensus disorder prediction 115 147 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01240 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182203 Bial10g01240 Bial22g00833
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
671054 Bial Bial10g01240 Bial-Chr10:12372143 Bial22g00833 Bial-Chr22:7943610
733350 Bial Bial10g01238 Bial-Chr10:12350180 Bial10g01240 Bial-Chr10:12372143