AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01243 ATGATCATAATGGGCAATTACAAGTTCAGGTTCTCTTGGTTTCACTCTTCCAACAAAAAAATTACCAAAACCCAACCCATCACAACTTCGTCGTCGTCTTCGTCCTCGTCGTTTCAGTTATCCCAACCATCAATTGACCAAAGAAAATCATATTACTTCACTAGAGAGCTAACCGAACCCGTAGTTGACCCTACCCGTATCCCCGAACCCCCAAGAAAATCCACCAAGAAAAAAAAACCAACCTCCCCAAATCGCCGACAGTTAAAATCTTTGGCAGCTGAATGCAGCTGCCAGAAATTAAAGCTGCAGGAGGTCAACTTTCCTGACAACAGTCCTTGCACGTGCAAAAGTAATTTGTCAGAGGACTTCGTCCTGTATGGGAAGGTTGACCTCCCGCGGATAATAACAAAACCCGAAAAGGAAAACGAATTCGGGTCGGGTAAATGGGTAATCGACGGAGCGAACCGGAGTTTATCGGTTCGGGTAGTGAAGGAGGGTAGTATCGGAAGCCCGGTGAGAAAACCGAAACCGAACGGTTACTCGCCGAGGTTAGGGAACCGGGTTCGGGTTAACGGGTTAAATCGGAGGAGAAGTGGGACCCGGAGAAGCTTATCGGAAAGTTTGGCGGTCGTGAAAACATCAATGGATCCGGGTAGAGATTTTAAGGAGTCAATGGTGGAGATGATAATGGAGAATAATATTAAGAGTTCTAAGGATTTGGAAGATCTTCTTGCATGCTATCTTGCATTGAATTCAGATGAGTATCATGACTTGATCATCAAGGTATTCAAACAAATTTGGTTCGAGAGTACTGATGTTAGACTGTAG 828 44.81 MIIMGNYKFRFSWFHSSNKKITKTQPITTSSSSSSSSFQLSQPSIDQRKSYYFTRELTEPVVDPTRIPEPPRKSTKKKKPTSPNRRQLKSLAAECSCQKLKLQEVNFPDNSPCTCKSNLSEDFVLYGKVDLPRIITKPEKENEFGSGKWVIDGANRSLSVRVVKEGSIGSPVRKPKPNGYSPRLGNRVRVNGLNRRRSGTRRSLSESLAVVKTSMDPGRDFKESMVEMIMENNIKSSKDLEDLLACYLALNSDEYHDLIIKVFKQIWFESTDVRL 275
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01243 275 NCBIfam uncharacterized plant-specific domain TIGR01568 209 268 IPR006458 -
Bial10g01243 275 MobiDBLite consensus disorder prediction 62 87 - -
Bial10g01243 275 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 32 269 IPR038933 GO:0045892(InterPro)
Bial10g01243 275 ProSiteProfiles OVATE domain profile. 210 269 IPR006458 -
Bial10g01243 275 Pfam Transcriptional repressor, ovate 214 269 IPR006458 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01243 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
182204 Bial10g01243 Bial22g00836
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
671057 Bial Bial10g01243 Bial-Chr10:12437520 Bial17g00511 Bial-Chr17:7690950
782134 Bial Bial10g01243 Bial-Chr10:12437520 Bial22g00836 Bial-Chr22:8018545
leaf

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Bial Ovate 8.2e-24 No_clan TF OFP