AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01267 ATGCATACTGCGTTTCGATTTTCAGGCGATCACATTCACAATAATAATAATAATAATAATAATAATAATTATAATAACATGTCTGCTGGTGCTCAGCTTCATCACTCTCCGGTTACCCGAAACAACCGTTGTTCGAATCCCACTAGACATATACATATGCCTAACCTCGGATTACCAAGCCCTACCTGCCCAAAACTCGTCGATTTCACCGCTTTAGGATTATCTTTCAGATTAAAGCCTGATTTGTTATCTAACCGACACGTGGTCCCCTGCGCTGGCGGTGATGGCGGTAGTTCCGGTATCGGTCACGGCAGCGGTGGTGGAGGTGACGGTGGAAGTGGCGACTGGAGCCGAGACGGGGGAAAGTCGGATGACTCGTCGTCGTTAGATAGTTTCGGTCCGATTGGGGCTTTTCTTAGCGGTTGGAGATCTCGGGTTGCTGCGGATCCTCAGTTTCCGTTCAAGGTGTTGATGGAAGAAGTTGTTGGTGTGAGTGCGAATGTGTTCGGTGACATGGCGACTCGTCCGAATTTCGGTTTGAACGAGCTTGATTTCGTGTTCTCGACACTTGTAGTCGGGTCGATCATGAATTTTACTCTAATGTACTTATTAGCCCCCACTATGACTTCTGGCTCAGCCGCACTGCCTTTCATATTCGCCAACTCACCACCGAGCCACATGTTTGAGTCGGGCGCGTACACTCTGGTCGACCGACTAGGGACGTTTGTTTACAAAGGAACCGTGTTTGCAGCCGTGGGTTTTGCAGCTGGGTTAGTAGGAACCGCATTGTCAAACGGGTTGATCAAGATGCGGAAGAAGATGGACCCGAGTTTTGAGTCACCAAACAAGGCCCCACCCACGGTTTTAAACGCGGTCACGTGGGCGATTCATATGGGTATAAGTAGTAATTTGAGGTACCAAAGTTTGAATGGGGTTGAGTTTATGTTGGCTAAGGGGTTGTCACCGTTTTTATTCAAGAGCTCGGTGATCGGGTTGAGGTTGGTGAACAATGTACTTGGCGGGATGACGTTTGTGATGTTGGCGAGGTTGACCGGTTCGCAAAGCGCGGGTGGAGAAGAGGACAAGGTTGGTTATGAAGAGAGTTCAGATGAGGAGAAGAAGTTGTTGGGTGATGAAATTGCATCAAAGTAA 1152 48.35 MHTAFRFSGDHIHNNNNNNNNNNYNNMSAGAQLHHSPVTRNNRCSNPTRHIHMPNLGLPSPTCPKLVDFTALGLSFRLKPDLLSNRHVVPCAGGDGGSSGIGHGSGGGGDGGSGDWSRDGGKSDDSSSLDSFGPIGAFLSGWRSRVAADPQFPFKVLMEEVVGVSANVFGDMATRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPTMTSGSAALPFIFANSPPSHMFESGAYTLVDRLGTFVYKGTVFAAVGFAAGLVGTALSNGLIKMRKKMDPSFESPNKAPPTVLNAVTWAIHMGISSNLRYQSLNGVEFMLAKGLSPFLFKSSVIGLRLVNNVLGGMTFVMLARLTGSQSAGGEEDKVGYEESSDEEKKLLGDEIASK 383
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01267 383 MobiDBLite consensus disorder prediction 9 29 - -
Bial10g01267 383 MobiDBLite consensus disorder prediction 94 128 - -
Bial10g01267 383 Pfam Protein RETICULATA-related 145 312 IPR021825 -
Bial10g01267 383 MobiDBLite consensus disorder prediction 354 383 - -
Bial10g01267 383 MobiDBLite consensus disorder prediction 360 383 - -
Bial10g01267 383 MobiDBLite consensus disorder prediction 1 29 - -
Bial10g01267 383 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 64 356 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01267 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182216 Bial10g01267 Bial22g00858
361530 Bial10g01267 Bial12g02715
361531 Bial10g01267 Bial24g02558
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
671075 Bial Bial10g01267 Bial-Chr10:12671930 Bial21g01404 Bial-Chr21:23248799
777558 Bial Bial10g01267 Bial-Chr10:12671930 Bial12g02715 Bial-Chr12:57349410
782151 Bial Bial10g01267 Bial-Chr10:12671930 Bial22g00858 Bial-Chr22:8244263
782949 Bial Bial10g01267 Bial-Chr10:12671930 Bial24g02558 Bial-Chr24:56452316