AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01272 | ATGGACGTCGAAAAGCGATCCCATCCATCCCGGAAGCTCCACCGGCGGAAACTCATCATCATCTGGTCATCCATCACCGGAGCCATCCTCACCATCGCCTTACTCCTCCTCATCCTCGGCCTCACCGTCTACAAGCCCAAAAAGCCAATCCTCACCCTCAACTCCCTCCACCTCCAAGACCTCCACGTCTCCCTCATCCCACCGCTCTCATTCAACCTCTCACTCGCCGTCAACATCACCATCACCAACCACAACAAGGTCACTATCAACTACCAATCCAGCTCCGCCACGCTCCGGTACAAAAACAACGACGTGGGTAACGTCCCGTTTCCGGATGGAAGGATCGGTGCGGATGGTTCGGCGGATTTGAACCTCACGTTAACTGTTTTCGCGGATCGGTTGGTCTCGGATTCGGATGTTTATGGGGATGTTGTTGCGGGGAATGTCCCGTTTTCGACTTATACTCGGGTTAAGGCTAAGGTGAGGGTTCTGTTTTTTTATATTCATGTCACGTCCACGTCCACGTGTGATGTTAGTGTCAATGTGGTGTCGCAAACCATTGCGAATCAGACGTGCTATTACAAGAATAAGATTTAG | 597 | 51.76 | MDVEKRSHPSRKLHRRKLIIIWSSITGAILTIALLLLILGLTVYKPKKPILTLNSLHLQDLHVSLIPPLSFNLSLAVNITITNHNKVTINYQSSSATLRYKNNDVGNVPFPDGRIGADGSADLNLTLTVFADRLVSDSDVYGDVVAGNVPFSTYTRVKAKVRVLFFYIHVTSTSTCDVSVNVVSQTIANQTCYYKNKI | 198 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01272 | 198 | SUPERFAMILY | LEA14-like | 32 | 136 | - | - | |
| Bial10g01272 | 198 | Pfam | Late embryogenesis abundant protein | 79 | 171 | IPR004864 | - | |
| Bial10g01272 | 198 | Gene3D | - | 39 | 181 | - | - | |
| Bial10g01272 | 198 | PANTHER | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY | 8 | 192 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01272 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 24010 | Bial10g01272 | Bial17g00048 | |
| 24011 | Bial10g01272 | Bial5g01136 | |
| 182220 | Bial10g01272 | Bial22g00864 | |
| 361534 | Bial10g01272 | Bial12g02718 | |
| 361535 | Bial10g01272 | Bial24g02561 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 671080 | Bial | Bial10g01272 | Bial-Chr10:12713346 | Bial15g02639 | Bial-Chr15:73657064 | |
| 777560 | Bial | Bial10g01272 | Bial-Chr10:12713346 | Bial12g02718 | Bial-Chr12:57369239 | |
| 778577 | Bial | Bial10g01272 | Bial-Chr10:12713346 | Bial17g00048 | Bial-Chr17:2139540 | |
| 782155 | Bial | Bial10g01272 | Bial-Chr10:12713346 | Bial22g00864 | Bial-Chr22:8276713 | |
| 782951 | Bial | Bial10g01272 | Bial-Chr10:12713346 | Bial24g02561 | Bial-Chr24:56473433 | |
| 783860 | Bial | Bial10g01272 | Bial-Chr10:12713346 | Bial5g01136 | Bial-Chr5:16278882 |