AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01280 ATGAAGATTGATAGTCACATTCTTGTTACAATCTCCATTGTTTCTCTCTTTTTTGTTATCTTAGCAGAAGGTACAGATTTCTCACCACCCGCGGCAGATGATGACGATGACGATGAAATATACGGTCAAGTTAAAAAGGCGATTGGCCCGGCTTTTGACGGAGCGAAAGACAAGTTTGGTCCAATATCATCATTGGATTTAGATGACTTTGAAGAGGCTAAAAATGCATTTGGTCCAATTCCATCATTTGATGAGGCCAAAGAGAATTTAGGCCCGGCTTCATCCGCGATTCTAGACAAAGCAAAAGATGCCATGGGCCCGATTTCACCTTCCTCTTTGGAAAATGCAAAAGAGGCCCTGGCCCCTGCAGCAGAGGCCCTAAGCCCAATTTCACCTGCGGCTTTAGATAAAGCAAAAGAGGCTCTCGGCCCGTCTTCATCTGGAATCATAGATAAGGCTAAAGATAAAATTAACTCGCTTAAATCTTGGATTACTCAAAGCAAGGAGGAAACGTCTTTAGATGCCCAAGACGACAACGACTCCGAGTCCGCAGATGATGCCGAGGCACCAAGCTCTATCGCCTCACCTTTGGACCCGTACGGGGTCTTAGACGGTGCTAAACAAAAATTTGACTCCCTTATGGACTCCATTTCCGAAGAAAAAGAACAGATATCACCATCGGTGGTCGAGGAAGCAGAAAACGAGTCGAGCCCGGCCCCTTCCAAAAGCCCATCAGATAAATCCAAAAACAAAAAGGGGCCAAGCCCAAGCCCAACTCCAAATCTTTCCAAAATTCTAGATGAGGCTAGAGATTCTACACCTATAACTACCCAAAACAAAGAGGAAACATCTGCTGATTCACCCTCCATTTCAGTCAAAGCCCAAAACGGAAAAGGCGCGAACGATGGCCTGATATCTGCCCCCGCACCCGCCCCTGTCCTGCCTTCAACTCTTAAGGAAGCACAAGACGCGATTGGTTCATATTCTTCTAAAGCTATGGACGCAGCAAAAGGAAAATTCAGCTCGCTCCAATCATTTTTGTCCGAAAATAAACTGCAAGAGTCACCCGAATCAGATATTAAACTCCATGCAGGCCCTGTATACTTTGACCACGATGCTGCATTGGCTGTCGAGTCAACGATCAAGCAGGCACAGGCAAATTCACAGTTAGCTATGGACCAGGCTAAAACAATATTAAGTGACCCGACTCTCGATAAGGCTAGTACTGGGAAATGTGTGGAACAATGCATGACTAACTATGAAACTTGTGTTCTGAAACTTAATAAGGCTATGGAAGATCTTAAGGCCCGCAATGTGGAAATGCTAACGGATGATATTAGTGCGGTTGAAAGTGAAATACGTGTGTGTCAAAAGTGTTTTCTTGAGAATACTAAAATGCAGTCACCGTTTAATGACTTGGAGGCGGCTACAATCAAGGCGACTCGTGAATGCTTAAACGTTTTAGATCATTCTGGCTGA 1479 44.83 MKIDSHILVTISIVSLFFVILAEGTDFSPPAADDDDDDEIYGQVKKAIGPAFDGAKDKFGPISSLDLDDFEEAKNAFGPIPSFDEAKENLGPASSAILDKAKDAMGPISPSSLENAKEALAPAAEALSPISPAALDKAKEALGPSSSGIIDKAKDKINSLKSWITQSKEETSLDAQDDNDSESADDAEAPSSIASPLDPYGVLDGAKQKFDSLMDSISEEKEQISPSVVEEAENESSPAPSKSPSDKSKNKKGPSPSPTPNLSKILDEARDSTPITTQNKEETSADSPSISVKAQNGKGANDGLISAPAPAPVLPSTLKEAQDAIGSYSSKAMDAAKGKFSSLQSFLSENKLQESPESDIKLHAGPVYFDHDAALAVESTIKQAQANSQLAMDQAKTILSDPTLDKASTGKCVEQCMTNYETCVLKLNKAMEDLKARNVEMLTDDISAVESEIRVCQKCFLENTKMQSPFNDLEAATIKATRECLNVLDHSG 492
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01280 492 SUPERFAMILY Plant invertase-pectin methylesterase inhibitor 378 486 IPR035513 -
Bial10g01280 492 MobiDBLite consensus disorder prediction 270 296 - -
Bial10g01280 492 Coils Coil 203 223 - -
Bial10g01280 492 MobiDBLite consensus disorder prediction 164 308 - -
Bial10g01280 492 Gene3D Invertase-pectin methylesterase inhibitor family protein 362 490 IPR035513 -
Bial10g01280 492 MobiDBLite consensus disorder prediction 229 262 - -
Bial10g01280 492 MobiDBLite consensus disorder prediction 213 228 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01280 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182224 Bial10g01280 Bial22g00873
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
778534 Bial Bial10g01280 Bial-Chr10:12795288 Bial17g00091 Bial-Chr17:2658436
782163 Bial Bial10g01280 Bial-Chr10:12795288 Bial22g00873 Bial-Chr22:8358859
783832 Bial Bial10g01280 Bial-Chr10:12795288 Bial5g01083 Bial-Chr5:15521072