Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01285 | ATGAAGTACGTGTTGGTGACCGGAGGCGTGGTTAGTGGCCTCGGCAAAGGCGTAACCGCCAGTAGCATTGGCGTTGTTCTTAAGGCATGCGGCCTTCGCGTCACTTCAATTAAAATCGATCCATATTTGAACACGGATGCTGGTACCATGTCTCCGTTTGAACATGGAGAGGTTTTTGTTCTTGATGATGGTGGAGAGGTCGATCTGGATCTCGGTAACTATGAACGGTTCTTAGATGTGAGACTTACCAGGGATAACAACATAACAACTGGAAAGATTTATCAGTCGGTTCTTGAGAAGGAGCGAAAAGGGGATTACCTTGGAAAGACGGTCCAGGTGGTCCCGCACATAACAGATGCGATTATGGATTGGATAGAGTCGGTTTCTGTTATCCCGGTTGATGGCAAAGAGGGGCCTGCAGATGTTTGTGTGATAGAATTAGGAGGAACAGTTGGTGACATTGAGTCTATGCCGTTTATAGAGGCTTTGCGACAGTTATTTTTCTCAAAAGGACCAGATAATTTCTGCCTGATTCATGTTAGCCTTGTACCGGTACTTGGTGTTGTTGGGGAACAGAAAACAAAACCTACACAACACAGTGTCCGAGAACTGCGAGCGTTAGGCCTAACACCTCACTTTTTAGCTTGTCGGTCTGCTCAGCCATTATTGGAAAATACAAAGCAAAAACTCTCACAATTTTGTCATGTGCCTGGTGCTAACATTCTCAATATACATGATGTTCCAAACATTTGGCACGTGCCTCTTTTACTTCGTAATCAAAATGCTCATGAGGCTATCCTAAAACAACTAGCACTAGTTAGTGTAGCCAAATCTCCAAATTTACAAGAGTGGACTACTAGGGCTGAAACTTTTGACAGTCTCACCAATTCTGTCAAGATTGCAATGGTGGGAAAATATGTTGGTCTAACCGACTCTTATTTGTCTGTTATTAAGGCTCTTCTTCATGCCTGCATTGCATGTTCATTAAAACCATCAATTGAATGGATTGCAGCTTCTGATCTTGAAGACGAAAGTGCCAAATCGACACCAGCAGCTCATTCAAAGGCCTGGGAGACACTAAGGAATTCAGCATGTGTTTTGGTTCCTGGTGGATTTGGTGACCGTGGTGTGAACGGGATGATATTAGCTGCTAAATATGCCCGAGAAAATAAAGTGCCATATCTTGGAATTTGTTTAGGCATGCAGATATCTGTTATTGAGATCTCTAGATCGATCTTGGGCTGGAAAGGGGCAAACAGTACTGAATTTGATGAGCATGCACCAAATCCTGTTGTAATATTCATGCCAGAGGGTTCAAGAACACACATGGGGAACACAATGAGACTCGGTTCTAGAAGAACCTTACTGCAGACTCCTGACTGTATCACTGCAAAACTGTATCACAATCCAGAGTATGTGGATGAGCGGCATCGTCATCGATACGAGGTGAATCCCGAGGTTGTCGGAGATTTGGAGAAGACCGGTTTAAGATTTGTGGGGAAGGATGAAAGTGGTCAACGGATGGAGATTTTAGAGCTTCAAAACCATCCGTTTTATGTGGGAGCGCAGTTTCATCCTGAATATAAATCGGGTCCTGGAAGGCCTTCGGCACTATTTTTAGGTCTTATATTAGCAGCAACGGGGCAGTTGGAAGCGTATGTGAAGTCGCATCAGAATGGATCTGTTTAG | 1689 | 44.05 | MKYVLVTGGVVSGLGKGVTASSIGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVRLTRDNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIMDWIESVSVIPVDGKEGPADVCVIELGGTVGDIESMPFIEALRQLFFSKGPDNFCLIHVSLVPVLGVVGEQKTKPTQHSVRELRALGLTPHFLACRSAQPLLENTKQKLSQFCHVPGANILNIHDVPNIWHVPLLLRNQNAHEAILKQLALVSVAKSPNLQEWTTRAETFDSLTNSVKIAMVGKYVGLTDSYLSVIKALLHACIACSLKPSIEWIAASDLEDESAKSTPAAHSKAWETLRNSACVLVPGGFGDRGVNGMILAAKYARENKVPYLGICLGMQISVIEISRSILGWKGANSTEFDEHAPNPVVIFMPEGSRTHMGNTMRLGSRRTLLQTPDCITAKLYHNPEYVDERHRHRYEVNPEVVGDLEKTGLRFVGKDESGQRMEILELQNHPFYVGAQFHPEYKSGPGRPSALFLGLILAATGQLEAYVKSHQNGSV | 562 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01285 | 562 | SUPERFAMILY | Class I glutamine amidotransferase-like | 297 | 548 | IPR029062 | - | |
| Bial10g01285 | 562 | CDD | GATase1-CTP-Synthase | 298 | 543 | IPR033828 | GO:0003883(InterPro)|GO:0006241(InterPro) | |
| Bial10g01285 | 562 | CDD | CTPS-N | 2 | 268 | IPR017456 | GO:0003883(InterPro)|GO:0006221(InterPro) | |
| Bial10g01285 | 562 | Pfam | CTP synthase N-terminus | 2 | 272 | IPR017456 | GO:0003883(InterPro)|GO:0006221(InterPro) | |
| Bial10g01285 | 562 | Gene3D | - | 1 | 292 | IPR027417 | - | |
| Bial10g01285 | 562 | FunFam | CTP synthase | 295 | 560 | - | - | |
| Bial10g01285 | 562 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 299 | 552 | - | - | |
| Bial10g01285 | 562 | PANTHER | CTP SYNTHASE | 1 | 558 | IPR004468 | GO:0003883(PANTHER)|GO:0003883(InterPro)|GO:0006221(InterPro)|GO:0006241(PANTHER)|GO:0019856(PANTHER)|GO:0042802(PANTHER) | |
| Bial10g01285 | 562 | Pfam | Glutamine amidotransferase class-I | 309 | 543 | IPR017926 | - | |
| Bial10g01285 | 562 | Gene3D | - | 295 | 560 | IPR029062 | - | |
| Bial10g01285 | 562 | NCBIfam | CTP synthase (glutamine hydrolyzing) | 1 | 544 | IPR004468 | GO:0003883(InterPro)|GO:0006221(InterPro) | |
| Bial10g01285 | 562 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 272 | IPR027417 | - | |
| Bial10g01285 | 562 | FunFam | CTP synthase | 1 | 292 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01285 | K01937 | CTP synthase [EC:6.3.4.2] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 182226 | Bial10g01285 | Bial22g00878 | |
| 361538 | Bial10g01285 | Bial12g02730 | |
| 361539 | Bial10g01285 | Bial12g02760 | |
| 361540 | Bial10g01285 | Bial24g02577 | |
| 361541 | Bial10g01285 | Bial24g02603 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 671091 | Bial | Bial10g01285 | Bial-Chr10:12842540 | Bial17g01686 | Bial-Chr17:47926929 | |
| 777566 | Bial | Bial10g01285 | Bial-Chr10:12842540 | Bial12g02730 | Bial-Chr12:57470280 | |
| 782168 | Bial | Bial10g01285 | Bial-Chr10:12842540 | Bial22g00878 | Bial-Chr22:8395683 | |
| 782957 | Bial | Bial10g01285 | Bial-Chr10:12842540 | Bial24g02577 | Bial-Chr24:56602272 |