AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01299 ATGGAATCAAGTGCTAAGCGATTCGCTTTGATTATTGTTTTGTTGTCGGTGACTGCTGTGTTTGCCTCGGCTGATAGTGGTTATGGGGAATCGAAGCCAGCAGGATACGTTCCCCAAAAACCCACTACACCAAAAGAGCAAACTGGTTATGAGAAACCCAATCCCAAGTTGCCAACAAAGCTCGTGATACCAAAAGAGGTATATGTGGGTTACAAGATCGATCCTAAGGTACCAACAAAACCCGTGATACCAAAAGAGGAGCATGGGGCCTACGAGAAGCCCAAGCCAAAGGTACCAACAAAGCCCTTGGTACCAAAAGAGGAGCACGGAGCCTATGAAAAGACAGGTCCTAAGTTGCCAACAAAACCCGTGATACCCAAACCGGACCATGAAAGTTATGAGAAAAACTATCCTAAGGTACCAACAAAGCCCTTGGTACCAAAAGAGGAGCACGGAGCCTATGAAAAGACAGGCCCTAAGCTACCAACAAAACCCGTGATACCCAAACCGGACTATGAAAGTTATGAGAAAAACTATCCTAAGGTACCAGTGACCAAGAAGCCGGTTTTACCCAAGCTGCCAGAGCACCCGAAGAACATAGCCGTTCAAGGTCTTATTTATTGTAAACATGGTTCCAAACTCCTCCCACTTCAAGGAGCGATTGCAAGAGTGACTTGTTTGGCAGTGCACAAGAACGGGTATGAATCCGCCCCATTTTCTTTCTTGAGTTGTCCAGCAAACGAAAAGGGTTACTTCTTGGCCAAAATACCATCATCAAAGCTTGTAAAAGACGATTTATGGGAGATCACAGAGTGCAAGGCATTCCTTGAAAACTCGCCATGGCCGAACTGCAAGGTTCCAGAAAATACCAACGGAGGAATTACTGGTGCTCTTGTTACATTCTCTCGTCATCTCAACAACAATGGATTTTGTTTGTCATCGGTAGGACCATTTATATACAATCCGGGCCATGAGTCGCTACCCAAGGAAGGTTACTAG 999 45.55 MESSAKRFALIIVLLSVTAVFASADSGYGESKPAGYVPQKPTTPKEQTGYEKPNPKLPTKLVIPKEVYVGYKIDPKVPTKPVIPKEEHGAYEKPKPKVPTKPLVPKEEHGAYEKTGPKLPTKPVIPKPDHESYEKNYPKVPTKPLVPKEEHGAYEKTGPKLPTKPVIPKPDYESYEKNYPKVPVTKKPVLPKLPEHPKNIAVQGLIYCKHGSKLLPLQGAIARVTCLAVHKNGYESAPFSFLSCPANEKGYFLAKIPSSKLVKDDLWEITECKAFLENSPWPNCKVPENTNGGITGALVTFSRHLNNNGFCLSSVGPFIYNPGHESLPKEGY 332
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01299 332 PANTHER OS01G0164075 PROTEIN 9 324 - GO:0071944(PANTHER)
Bial10g01299 332 MobiDBLite consensus disorder prediction 83 115 - -
Bial10g01299 332 Pfam Pollen protein Ole e 1 like 202 296 - -
Bial10g01299 332 MobiDBLite consensus disorder prediction 28 57 - -
Bial10g01299 332 MobiDBLite consensus disorder prediction 83 146 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01299 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182238 Bial10g01299 Bial22g00893
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
671101 Bial Bial10g01299 Bial-Chr10:12931496 Bial22g00894 Bial-Chr22:8527544
738252 Bial Bial10g01299 Bial-Chr10:12931496 Bial10g01300 Bial-Chr10:12935619
777570 Bial Bial10g01299 Bial-Chr10:12931496 Bial12g02736 Bial-Chr12:57504280
782180 Bial Bial10g01299 Bial-Chr10:12931496 Bial22g00893 Bial-Chr22:8522980
782961 Bial Bial10g01299 Bial-Chr10:12931496 Bial24g02582 Bial-Chr24:56630721