AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01314 ATGGAGACAGAGTGGTACCATGACGTTCCTTGCTCCTCCATCGCCGTCGAATCCATCATCAGTGTCGGAACTGGCGGATTAATCTGGGGTTCATGTGCTGGCTCCTACGATGCTAACCAAAAAGGGCTTACCGGTATTTCGAGAGCTTCTTTCCTTGCCAAGACCGTTGGTAAATACGGGTTTCAATGCGGTCTCTTTGCCGGAATTTTTTCATTTACGCGTTGTGGGATTCGAAGATACCGCAACAAAAATGATTGGGTGAACGCTCTAGTTGCAGGTGGGGTTGCAGGTGCAGCCATAGGTGCTGGGACCCGAAACTGGAGGCAGGTTGCGGTGATGACTGCTTTTCTTTCTGGATTTTGCGCCATTGCTGACCAGTCAAGAGCAATCTGA 393 50.13 METEWYHDVPCSSIAVESIISVGTGGLIWGSCAGSYDANQKGLTGISRASFLAKTVGKYGFQCGLFAGIFSFTRCGIRRYRNKNDWVNALVAGGVAGAAIGAGTRNWRQVAVMTAFLSGFCAIADQSRAI 130
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01314 130 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 13 126 IPR039175 GO:0008320(PANTHER)|GO:0030943(PANTHER)|GO:0042721(PANTHER)|GO:0042721(InterPro)|GO:0045039(PANTHER)|GO:0045039(InterPro)
Bial10g01314 130 Pfam Tim17-Tim22-Tim23-Pmp24 family 16 120 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01314 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
182245 Bial10g01314 Bial22g00905
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13081016 Bial22g00905 Bial-Chr22:8641204 wgd