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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01316 ATGGCGAACACGGAAACGGAACAGAAACCGGTGATGGTAGTCGGCATCGATGACAGCGATCACAGCTTTTACGCACTGGAATGGACTCTCGATCACTTTCTAGTGCCTTCTGCTCCTAATACTCCATTCAAGCTGATAGTTGTTCATTCCAAGCCTTCTCCGACTTCAGCTATCGGTTTCGCTGGTCCAGGTGCAGCGGATGTGTATCCGTTTGTGGATTCGGATTTGAAGAAGATCGCTGCAAGAGTCGTGGAAAGAGCTAAGGAGCTTTGTCATTCGAAATCGGTGAATGATGTGAAGGTTGAAGTTGTGGAAGGCGATGCCAGAAATGTTCTATGTGAAGCTGTGGAGAGGCATCATGCTACCATGCTGGTAGTCGGTAGCCATGGTTATGGAGCAATTAAAAGGGCGGTTTTGGGGAGTGTAAGTGACTATGTTACTCATCATGCCCATTGCACTGTGATGATTGTGAAGAAGCCAAAGACCAAGCACTCGGCTGTGCCGGCACATCTAGCTACCATTACTGCCACTTACTTGGCGGCACCTGCTACCACTTCTAGCTGGCAGTGTGGCCAATTATTGCATGTAGTTATGCTTAGTACGATACCACCGGTTACTTTTTCCTTCCAGCAGCCTGGGGACTTAGGGGTGTTCGTGACGGGTTGCGGGTTCAGTTTAAAGTTAGAGCCGATCTTGAAGTCGTCCTGA 708 48.87 MANTETEQKPVMVVGIDDSDHSFYALEWTLDHFLVPSAPNTPFKLIVVHSKPSPTSAIGFAGPGAADVYPFVDSDLKKIAARVVERAKELCHSKSVNDVKVEVVEGDARNVLCEAVERHHATMLVVGSHGYGAIKRAVLGSVSDYVTHHAHCTVMIVKKPKTKHSAVPAHLATITATYLAAPATTSSWQCGQLLHVVMLSTIPPVTFSFQQPGDLGVFVTGCGFSLKLEPILKSS 235
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01316 235 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 162 - -
Bial10g01316 235 CDD USP-Like 12 157 - -
Bial10g01316 235 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 160 - -
Bial10g01316 235 Pfam Universal stress protein family 12 158 IPR006016 -
Bial10g01316 235 Gene3D HUPs 5 170 IPR014729 -
Bial10g01316 235 PRINTS Universal stress protein signature 118 130 IPR006015 -
Bial10g01316 235 PRINTS Universal stress protein signature 136 158 IPR006015 -
Bial10g01316 235 PRINTS Universal stress protein signature 9 27 IPR006015 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01316 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
24022 Bial10g01316 Bial5g01054
182246 Bial10g01316 Bial22g00907
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13090705 Bial17g00132 Bial-Chr17:3128367 dispersed
Bial Bial-Chr10:13090705 Bial22g00907 Bial-Chr22:8649231 wgd