Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01332 | ATGGTGTTCCTGTCCGCAATGAACAACATTCAAATGACGTCATCGAGAATCGTTCCTTCAATACCACCACAATTTTCACCTCGATTCAACCTACCGAACAGATGCCTCTTCGTTCGCCCTTCGCGAACTCAAAAACCGCTCACGCGAATCGTTTGCATGGCTGAGCCTTATCTTTTGAAGAAACTCGATTCGGCTGAGAAAACCTGGAAAGAGTTATCGGTTAAGTTAGCAGATCCTGATGTGGTTTCAAATCCTAGTGAGTACCAAAAGCTAGCACAATCTATGTCTGAACTTGATGAGGTTGTAGCAACATACAGAGGATTCAAGGATTGTGAGAAACAGCTTGAAGAGTCCAAAGTTTTATCAAAAGATCCTGACATTGATGAAGAGATGGCTGAGATGATAGCTTCTGAAATTGAAACTTTATCTGACCAACTTTTGATGCTACTGATTCCAACTGATCCTCTGGATTCTAGAAACATCTTGCTTGAAGTTAGGGCTGGTACAGGTGGTGAAGAGGCTGGACTTTGGGCCGCTGACCTTGCTGAAAGAGGAGGATACAAGACTTATGTTATGGAAGTTAAAGGTGCTCGGGTATATAGTAAACTAAAGTATGAATCGGGTGTCCATAGAGTCCAACGTGTCCCTCAAACCGAAACCCAAGGCCGTATACACACTTCAACTGCCACAGTGGCCATCATGCCAGAGGTAGTTACTTTACACCTTATGCAACTTTTAACTACTTTGCTAGTGCTACTTAAGAAGTTTGACGTGATGAGACTCGAGTTCATAAACAAGGTGGCAAAATTGGCAAGTGGGGCGGGTTCAGATGGTCAAGGGTCAGAACAGGTTTACCCGCTATATATTTTTATTGCCGCTGGTAGCGATGATGGAGGTGGCTACGTCGGTGATAAGGATGATTTTGGACGTGGCGGGGGGATGGCAGGGACTGAGGCGGAAGTAGTGGTGGTTGGTGAGTGTGGGACGGTTGAGGCGCTGGTGGCTGAAGAAGTTGATGTGGTAATTGATCCAAAAGATATTGATCTTACAACTGCAAGATCTGGTGGTGCTGGAGGTCAGAATGTGAATAAGGTGGAAACCGCAGTGGATCTTTTCCACAAGCCAACCGGAATCAGAATCTTTTGCACAGAAGAAAGAAGCCAACTTAAAAATAAAACGCGTGCACTTCAACTATTGCGTGCAAAACTGGTCACTGATCATAGATTAAAGATGAACTTTGAGCTCACTTCATTTCTAGACGGTGACATTGAGACGGCTATTCAGTCTTGTGCTTCTATGGAGCAAAGGGAATTGCTAGAAGAGCTTGCTGATTCGGTAGGAACTGCAGCACGATAA | 1356 | 44.62 | MVFLSAMNNIQMTSSRIVPSIPPQFSPRFNLPNRCLFVRPSRTQKPLTRIVCMAEPYLLKKLDSAEKTWKELSVKLADPDVVSNPSEYQKLAQSMSELDEVVATYRGFKDCEKQLEESKVLSKDPDIDEEMAEMIASEIETLSDQLLMLLIPTDPLDSRNILLEVRAGTGGEEAGLWAADLAERGGYKTYVMEVKGARVYSKLKYESGVHRVQRVPQTETQGRIHTSTATVAIMPEVVTLHLMQLLTTLLVLLKKFDVMRLEFINKVAKLASGAGSDGQGSEQVYPLYIFIAAGSDDGGGYVGDKDDFGRGGGMAGTEAEVVVVGECGTVEALVAEEVDVVIDPKDIDLTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLKNKTRALQLLRAKLVTDHRLKMNFELTSFLDGDIETAIQSCASMEQRELLEELADSVGTAAR | 451 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01332 | 451 | FunFam | Peptide chain release factor 1 | 343 | 408 | - | - | |
| Bial10g01332 | 451 | SUPERFAMILY | Release factor | 333 | 439 | IPR045853 | - | |
| Bial10g01332 | 451 | Pfam | RF-1 domain | 336 | 407 | IPR000352 | GO:0003747(InterPro)|GO:0006415(InterPro) | |
| Bial10g01332 | 451 | Gene3D | - | 52 | 155 | - | - | |
| Bial10g01332 | 451 | SMART | PCRF-a-2 | 116 | 206 | IPR005139 | GO:0006415(InterPro) | |
| Bial10g01332 | 451 | ProSitePatterns | Prokaryotic-type class I peptide chain release factors signature. | 353 | 369 | IPR000352 | GO:0003747(InterPro)|GO:0006415(InterPro) | |
| Bial10g01332 | 451 | Gene3D | - | 184 | 446 | - | - | |
| Bial10g01332 | 451 | Gene3D | - | 157 | 183 | - | - | |
| Bial10g01332 | 451 | Pfam | PCRF domain | 66 | 182 | IPR005139 | GO:0006415(InterPro) | |
| Bial10g01332 | 451 | Pfam | PCRF domain | 183 | 231 | IPR005139 | GO:0006415(InterPro) | |
| Bial10g01332 | 451 | Gene3D | - | 318 | 404 | - | - | |
| Bial10g01332 | 451 | PANTHER | LD18447P | 53 | 403 | IPR050057 | GO:0009507(PANTHER)|GO:0009658(PANTHER)|GO:0010027(PANTHER)|GO:0032544(PANTHER) | |
| Bial10g01332 | 451 | SUPERFAMILY | Release factor | 67 | 237 | IPR045853 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01332 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 182255 | Bial10g01332 | Bial22g00922 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:13303221 | Bial9g00192 | Bial-Chr9:2174497 | dispersed | |
| Bial | Bial-Chr10:13303221 | Bial22g00922 | Bial-Chr22:8862297 | wgd |