Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01344 | ATGGGGTATTCGTTCCCGGAGGAGGTGTTAGAGCATGTGTTTTCATTTATAACGTTGCATACGGACCGAAACGCTGTTTCGTTGGTGTGCAAGTCATGGTATGAGATAGAGCGGTGGTGCAGGAGGAGGATTTTTATAGGGAATTGTTACGCGGTGAACCCGGGTATTATGATTAGGAGGTTTCCGGAGGTGAGATCTGTGGAGTTGAAAGGGAAGCCGCATTTTGCGGACTTTAATTTGGTGCCGGATGGTTGGGGCGGGTATTTTTACCCGTGGATCTGTGAAATGGCGAGGGTGTATCCGTGGTTGGAGGAGATCAAGCTTAAGAGGATGGTGATTACTGATGAGAGCTTGGAGTTGATTTCGAAGTCGTTTAAGAACTTTAAGGTGTTGGTTTTGTCGTCGTGTGAGGGGTTCAGTACCGATGGACTCGCTGCCATTGCTGCCAATTGCAGAAATCTTCGAGAACTCGATTTGAGGGAGAGTGAAGTGGAAGACTTGAGTGGGCACTGGTTAAGTCATTTTCCTGATTCCTGCACCTCACTGCAATCCCTTAACATGTCTTGTTTATCATCCGAGGTGGGTTTTTCAGCACTCATACGCCTCATTGCCCGCTCACCGAACCTAAAAACTCTTCGACTCAACCGTGCGGTTCCCCTTGAAAAACTTTCCACTCTACTCCACCGGGCGCCACAGCTTGTTGAACTGGGCACTGGTGCATATTCTGCTGAAATTCGACCCGATGTGTTATCAAATTTAACAGAAGCTTTCGCTAAATGCAAAGAACTTGAGGGTCTATCTGGATTTTGGGATGTTGTTCCTTTTTATCTACCGGCTTTTTATTCTGTTTGTTCTAGACTTACTTCCTTAAACTTGAGTTATGCCACTATTCAAAGCCCGGATGTTACCAAAGTCATCACTCAGTGTCCTAATCTGCAGAGTTTATCAGTGTTGGATTACATTGAAGACACCGGGCTTGATGCACTCTCTTTATCGTGTAAAGAGTTAAGAGAACTTAGGGTTTTCCCATCTGACCCGTTTGTGGCTGATGCGAACGTATCGTTAACCGAACAAGGTCTGGTTTCAGTTTCTGAAGGGTGCTCAAAGCTCCAGTCGGTTCTTTACTTCTGCAGACAGATGTCGAACTCTGCATTAACCACGATTGCCAAAAACCGACCTAACCTGATCTGTTTCCGTCTCTGCATTCTCGAGCCACGGGCCCCTGATTACGAAACCCTCGAACCACTTGATCACGGGTTTGGAGCCATAGTTGACCACTGTAAACAGCTTCAACGTCTGTCATTATCCGGTCTGTTAACTGACCGTGTGTTTGAGTACATCGGGAATCGTGCTAAGAAGTTAGAGATGCTTTCGATAGCATTTGCGGGTGATAGTGATTTGGGCCTGCATTATGTGTTATCGGGCTGTGAGAGCTTACGGAAGCTTGAGATTAGAGATTGCCCGTTCGGGGACAAGGCTTTGTTGGCTAATGTTTCCAAATTGGAGACAATGCGATCCCTTTGGATGTCTTCGTGCTCGGTTAGTCTCGGTGCGTGTAAGCAGTTGAGTCAGAAGATGCCTCGTCTTAACGTTGAAGTTATTGACGAGCAGGGGGATCTAGATTCCCGACCTGATAGTTGTCATGTTGAGAAACTTTATGTATATCGCACGGTTGCTGGGCCTCGGTTTGACATGCCTAGTTTTGTACGGACTATGAGTCAGAACCCTGCAAACAGGAGATAG | 1743 | 46.64 | MGYSFPEEVLEHVFSFITLHTDRNAVSLVCKSWYEIERWCRRRIFIGNCYAVNPGIMIRRFPEVRSVELKGKPHFADFNLVPDGWGGYFYPWICEMARVYPWLEEIKLKRMVITDESLELISKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRESEVEDLSGHWLSHFPDSCTSLQSLNMSCLSSEVGFSALIRLIARSPNLKTLRLNRAVPLEKLSTLLHRAPQLVELGTGAYSAEIRPDVLSNLTEAFAKCKELEGLSGFWDVVPFYLPAFYSVCSRLTSLNLSYATIQSPDVTKVITQCPNLQSLSVLDYIEDTGLDALSLSCKELRELRVFPSDPFVADANVSLTEQGLVSVSEGCSKLQSVLYFCRQMSNSALTTIAKNRPNLICFRLCILEPRAPDYETLEPLDHGFGAIVDHCKQLQRLSLSGLLTDRVFEYIGNRAKKLEMLSIAFAGDSDLGLHYVLSGCESLRKLEIRDCPFGDKALLANVSKLETMRSLWMSSCSVSLGACKQLSQKMPRLNVEVIDEQGDLDSRPDSCHVEKLYVYRTVAGPRFDMPSFVRTMSQNPANRR | 580 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01344 | 580 | SUPERFAMILY | RNI-like | 66 | 530 | - | - | |
| Bial10g01344 | 580 | FunFam | Transport inhibitor response 1 | 1 | 41 | - | - | |
| Bial10g01344 | 580 | Pfam | Transport inhibitor response 1 protein domain | 62 | 108 | IPR041101 | - | |
| Bial10g01344 | 580 | Gene3D | - | 1 | 41 | - | - | |
| Bial10g01344 | 580 | FunFam | Transport inhibitor response 1 | 42 | 572 | - | - | |
| Bial10g01344 | 580 | PANTHER | F-BOX-TPR REPEAT PROTEIN POF3 | 252 | 537 | - | GO:0019005(PANTHER)|GO:0031146(PANTHER) | |
| Bial10g01344 | 580 | Gene3D | Ribonuclease Inhibitor | 42 | 572 | IPR032675 | - | |
| Bial10g01344 | 580 | SUPERFAMILY | F-box domain | 4 | 38 | IPR036047 | GO:0005515(InterPro) | |
| Bial10g01344 | 580 | SMART | LRR-CC-2 | 427 | 450 | IPR006553 | - | |
| Bial10g01344 | 580 | SMART | LRR-CC-2 | 367 | 391 | IPR006553 | - | |
| Bial10g01344 | 580 | SMART | LRR-CC-2 | 309 | 332 | IPR006553 | - | |
| Bial10g01344 | 580 | SMART | LRR-CC-2 | 179 | 202 | IPR006553 | - | |
| Bial10g01344 | 580 | SMART | LRR-CC-2 | 100 | 124 | IPR006553 | - | |
| Bial10g01344 | 580 | SMART | LRR-CC-2 | 125 | 150 | IPR006553 | - | |
| Bial10g01344 | 580 | SMART | LRR-CC-2 | 476 | 500 | IPR006553 | - | |
| Bial10g01344 | 580 | Pfam | F-box | 3 | 43 | IPR041567 | - | |
| Bial10g01344 | 580 | CDD | F-box-AtTIR1-like | 4 | 41 | - | - | |
| Bial10g01344 | 580 | SMART | fbox-2 | 5 | 46 | IPR001810 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01344 | K14485 | transport inhibitor response 1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:13453070 | Bial11g00099 | Bial-Chr11:2197425 | dispersed | |
| Bial | Bial-Chr10:13453070 | Bial17g00154 | Bial-Chr17:3395027 | wgd | |
| Bial | Bial-Chr10:13453070 | Bial19g02421 | Bial-Chr19:59825033 | wgd | |
| Bial | Bial-Chr10:13453070 | Bial22g00937 | Bial-Chr22:9013289 | wgd | |
| Bial | Bial-Chr10:13453070 | Bial5g01032 | Bial-Chr5:14794744 | wgd |