AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01347 ATGGAGTTGAAGAGCAAGTTATCAGCACAATGGTGGTGGTTTGACAGTCAAAGCAACAGCATCCCCAGAAAATCACCATGGTTACACTCCACTCTTGCAGAATTGGATGAGAAGACTGAGGCAATGCTAAAACTAATCGAGGAAGACGCCGACTCATTCGCGAAACGAGCAGAAATGTACTACAAGAAACGACCGGAGCTCATTACCATAGTCGAAGATCTCTACCGGGCTCACCGCTCATTAGCAGAAAAATATGATCAAGTCAAGTTTGAAAGCGGTAACCGTCACTTGACTCCATGGACATCTTGCCCCTCACCATTATCCAAGTTCAGAACTTCCCATTTGGTTAAGGAATCGGAGAAAGGATACGACAGTTATTCCGAGTCGATTGACTTTGATCATGATTATTTTGACTCTGATGATTCTGTGGTGATTGATGATCTTGAACCACAACAAGAACAAGAACAAGAACAAGAAGACGTTAATCAAGTTATCCGCTTTTATGAAGAAACCGAAAAAGCTGCGAATTTTGAAGCGGAAATGGTGAAACTGAGGGAAGAATTTGAGAAACTGAAACAAGAAAACAAGATTCAGAAAGAAGAGTTGATTCGGAAAGATGAGGAGAAGAAAGAGGCAATAAGACAGTTAAGCTTTTGTGTGGATTTTCTTAAGCAAGAGAATAATAATCTGAAATCAAGAATTGCTAAAGATTCAGCCAAGAAGCAAAACAACAGCAGCAGCAATCAGTTTGAGTTCACAAAACTGAAAGGGGTATTTTGGGGAATGTTATTTAATGGTGAAGCAACTACTACTGTGCCTTTGTAG 825 40.36 MELKSKLSAQWWWFDSQSNSIPRKSPWLHSTLAELDEKTEAMLKLIEEDADSFAKRAEMYYKKRPELITIVEDLYRAHRSLAEKYDQVKFESGNRHLTPWTSCPSPLSKFRTSHLVKESEKGYDSYSESIDFDHDYFDSDDSVVIDDLEPQQEQEQEQEDVNQVIRFYEETEKAANFEAEMVKLREEFEKLKQENKIQKEELIRKDEEKKEAIRQLSFCVDFLKQENNNLKSRIAKDSAKKQNNSSSNQFEFTKLKGVFWGMLFNGEATTTVPL 274
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01347 274 Coils Coil 220 240 - -
Bial10g01347 274 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 92 IPR011684 GO:0003779(InterPro)
Bial10g01347 274 Pfam KIP1-like protein 11 86 IPR011684 GO:0003779(InterPro)
Bial10g01347 274 Coils Coil 151 171 - -
Bial10g01347 274 Coils Coil 174 215 - -
Bial10g01347 274 PANTHER PROTEIN NETWORKED 4A 9 193 IPR051861 GO:0005774(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01347 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
182263 Bial10g01347 Bial22g00941
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13498226 Bial11g00101 Bial-Chr11:2227762 dispersed
Bial Bial-Chr10:13498226 Bial22g00941 Bial-Chr22:9055283 wgd