AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01358 ATGACGGCTTACTTGATTCCGATTGTTGTTGATGGTGCAATGAAGCCTGTATTTCAGATTAGATGGTTTACTCGTGTATCTGAGGTAGGTTTTTACTTGACAATTTCCGATTCTATACATTATGTTAATCTTAATCATGTTCCATTTTGCTTACAGTTCCAACTTTGTGGTCATGCAACTTTAGCAGCCGCACACTTTCTTTTTCAGTCCGGATTGGTAACTTCTAACACAGTTGAATTCTCAACCCTATCTGGAAATCTTATTGCAAAACGAATTCCGGATAAGAAGGTCTATGGTGAATTAGATGATGGCTTCTACATAGAATTAGATCTCCCTGCCGTGCCTATTTCTGATTACAATGATATTGAGGTTTCTGCGATTTCCGAAATATTAAACGGTGTTTCTGTTGTTGATGATCTAAAGAAGAATGCATTTGATGACATCATTGTGGTTCTTCCATCTGGAAAAGAAGTTGCGGCTTTCAAGCCGCAATTTAATAAGATCAAAGAAGCTCCAGGCAGGGCGATAATAATTACAGCACGTGCATCTAATGAGTCAGAGTTTGACTTTTATTCTCGCGCTTTCGGTCCTAAAGTTGGTGTTGATGAGGATCCTGTTTGTGGGAGTGCACATTGTGCATTAGCAGTATATTGGCATGAGAAGTTGGGGAAATGTGATTTTATTGCTTATCAGGTGGACGCATTTACGGACAGACCATTTAAAGGAAATCCAGCAGCTGTGTGTTTGTTAAGGGACACGGTGAAAGATGATAAGTGGTTGCAATCAGTGGCGACGGAGTTCAATCTTCCAATGACGGCTTACTTGTTTCCGACTGATGTCCACAGTGCAAGAAAGCCTATATATCAGATTAGATGGTTTACTCCTGTATTCGAGGCAGCCACGTCTGGAAATCTTATTGCAAAACGAATTCCGGATAACAAGATCAATGGTGAATTAGATGATGTCTTCTACGTAGAAGTAGATCTCCCTGTCGTGCCAATTTCAGATTACAATGATATTGAGGTTTCTGCAATGTCTGAAATATTAAACGGTGTTTCTGTTGTTGATGTTCTAAAGAAGAATGTATTTGATGACATCATTGTGGTGCTTTCATCAGGAGAAGAAGTTGTAGCTTTCAAACCTCAGTTTGATAAGATCAAAGAAGCTCCAGGCCGGGCAATAATAATTACAGCACCCGCATCTAACGGGTCAGAGTTTGACATTATTTCTCGTGTTTTTGTTCCTAAGGCTGGTGTTGATGAGGATCCTGTTTGTGGGAGTGCACATTGTGCATTAGCAGTCTATTGGCATGAGAAGTTGGGGAAATGTGATTTTGTTGCATATCAGGCATCGCCTAGAGGTGGTGTATTACATGTGCATCTAGATAAGGAGAATCAACGAGTACTTCTTCGTGGTAAAGCCACCACAGTCATGGAAGGGTCTCTTTTGGTGTAA 1455 40.41 MTAYLIPIVVDGAMKPVFQIRWFTRVSEVGFYLTISDSIHYVNLNHVPFCLQFQLCGHATLAAAHFLFQSGLVTSNTVEFSTLSGNLIAKRIPDKKVYGELDDGFYIELDLPAVPISDYNDIEVSAISEILNGVSVVDDLKKNAFDDIIVVLPSGKEVAAFKPQFNKIKEAPGRAIIITARASNESEFDFYSRAFGPKVGVDEDPVCGSAHCALAVYWHEKLGKCDFIAYQVDAFTDRPFKGNPAAVCLLRDTVKDDKWLQSVATEFNLPMTAYLFPTDVHSARKPIYQIRWFTPVFEAATSGNLIAKRIPDNKINGELDDVFYVEVDLPVVPISDYNDIEVSAMSEILNGVSVVDVLKKNVFDDIIVVLSSGEEVVAFKPQFDKIKEAPGRAIIITAPASNGSEFDIISRVFVPKAGVDEDPVCGSAHCALAVYWHEKLGKCDFVAYQASPRGGVLHVHLDKENQRVLLRGKATTVMEGSLLV 484
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01358 484 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 1 125 - -
Bial10g01358 484 SUPERFAMILY Diaminopimelate epimerase-like 52 231 - -
Bial10g01358 484 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 135 230 - -
Bial10g01358 484 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 231 306 - -
Bial10g01358 484 PANTHER PHENAZINE BIOSYNTHESIS PROTEIN 230 298 IPR003719 GO:0003824(InterPro)|GO:0005737(PANTHER)|GO:0009058(InterPro)|GO:0016853(PANTHER)
Bial10g01358 484 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 337 472 - -
Bial10g01358 484 SUPERFAMILY Diaminopimelate epimerase-like 230 483 - -
Bial10g01358 484 Pfam Phenazine biosynthesis-like protein 317 480 IPR003719 GO:0003824(InterPro)|GO:0009058(InterPro)
Bial10g01358 484 Pfam Phenazine biosynthesis-like protein 232 302 IPR003719 GO:0003824(InterPro)|GO:0009058(InterPro)
Bial10g01358 484 Pfam Phenazine biosynthesis-like protein 54 227 IPR003719 GO:0003824(InterPro)|GO:0009058(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01358 K06998 trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13613126 Bial10g01361 Bial-Chr10:13629557 dispersed
Bial Bial-Chr10:13613126 Bial10g01359 Bial-Chr10:13621964 tandem
Bial Bial-Chr10:13613126 Bial22g00952 Bial-Chr22:9170048 wgd