AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01359 | ATGGCCGTCAAATACTCCGTTGTGGACGCGTTTACCGACACCGCGTTTAAAGGAAATCCGGCTGTCGTGTGTTTGTTAGAGGATGTTGAGAAGGATGATAAGTGGCTGCAGTCAGTTGCAACTGAATTTAATCTTCCAACAACATGTTACCTGACTCCGGTTGCAGATCAGGGCTCCGAACACCCGAGATTCAAGCTCCGGTGGTTCACTACTGTATCTGAGGTGAAACTTTGTGGTCATGCAACTTTAGCAGCTGCACACTTTCTTTTCCGATCTGGATTGGTGAAATCTAATGTGATTGAATTCTCAACGTTATCCGGAATTCTGATTGCTAAACGAATTCCGGATAATATATTCGGGGAAGTACCAAATGAGGAAATAGATGATAGATTCTACATAGAGTTGGATTTTCCTGTTGTGCCGATTTCAGATTACAAAGAAGTTGAGGTTTCCGCAATTTCGGAGATATTAAATGGTGTTTCTGTTATTGATGTTGTGAAGATGAATGCACTTGATGATATTATTGTGGTGCTTCCATCTGGAGAAGAAGTTGCAGCATTCAAGCCACAATTTAATAAGATCAAAGAAGCTCCGGGCAGGGCGATAATAATTACAGCACCTGCTTCTTACGGGTCAGGGTTTGACTTTTGTTCTCGTGTGTTCGGGCCTAAGATTGGTGTTGATGAGGATATTGTTACCGGGAGTGCACATTGTGCATTAGCAGTCTATTGGCATGAGAAGTTGGGGAAATGCGATTTTGTTGCATTACAGGCGTCCCGTAGAAGTGGTGTATTACATATCCATCTTGATAAGGAGAATCAACGAGTACTTATTCGCGGTAAAGCCACCACAGTCATGGAAGGGTCTCTTTTGGTGTAA | 879 | 42.89 | MAVKYSVVDAFTDTAFKGNPAVVCLLEDVEKDDKWLQSVATEFNLPTTCYLTPVADQGSEHPRFKLRWFTTVSEVKLCGHATLAAAHFLFRSGLVKSNVIEFSTLSGILIAKRIPDNIFGEVPNEEIDDRFYIELDFPVVPISDYKEVEVSAISEILNGVSVIDVVKMNALDDIIVVLPSGEEVAAFKPQFNKIKEAPGRAIIITAPASYGSGFDFCSRVFGPKIGVDEDIVTGSAHCALAVYWHEKLGKCDFVALQASRRSGVLHIHLDKENQRVLIRGKATTVMEGSLLV | 292 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01359 | 292 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 7 | 288 | - | - | |
| Bial10g01359 | 292 | PANTHER | PHENAZINE BIOSYNTHESIS PROTEIN | 1 | 292 | IPR003719 | GO:0003824(InterPro)|GO:0005737(PANTHER)|GO:0009058(InterPro)|GO:0016853(PANTHER) | |
| Bial10g01359 | 292 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 139 | 280 | - | - | |
| Bial10g01359 | 292 | SUPERFAMILY | Diaminopimelate epimerase-like | 1 | 291 | - | - | |
| Bial10g01359 | 292 | PIRSF | Ismrse-PhzF | 1 | 292 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Bial10g01359 | 292 | Pfam | Phenazine biosynthesis-like protein | 8 | 288 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01359 | K06998 | trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:13621964 | Bial22g00954 | Bial-Chr22:9178073 | dispersed | |
| Bial | Bial-Chr10:13621964 | Bial10g01361 | Bial-Chr10:13629557 | proximal | |
| Bial | Bial-Chr10:13613126 | Bial10g01359 | Bial-Chr10:13621964 | tandem |