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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01362 ATGGCGTCTCCTGATGTTTTTCTGCATCTATTTCATCTTACCAAAGGCGATACTAAATCTCGAGGACTTGCATTTGAGAAAAAAATCGAATACCTTGAGAGCTTGAACGACAGAGTTAGCAACAGACGAGCACGTAGATGGATAAACGATCGTATACTGTTGGAGCTTGTTCCTCGTTTAACTGGAGATGAAATTAGAGGCTTATTTGCTCCACCACCTTGGGGTGATAAGGCACGACCTTCGCCATTTAGCATGACAAATGTTGGGGAGTGGGACAAATTTAGAAATATAGACATGGATGAAGAGGCTGGTGAGATAGAGGCACTTAAAGGTTCCTCATCAAAGAAGAAAAGCCATGCGGATGCTGATAAGTTAGCCGCGTTAACCAATTGGCACAGGGTTGACTGCAAAACTCGCGACGCGTTTCGTAGAAGCTTCCTTCCTGAACTTGTTGATGGTTATGAGGAGAAAATACGGGCGTTTGTCTCAGAGACAGGTGGCAAGGAGGTTCTTGTAATTCGTGTCCAAGATCCGTTCCATAGATTATTATTTCATGGTGTTTGCGAGTTTTACAATCTGGTCTCAACAACCGAATCAGAAACCGAAGGTGCAAAGGTGTTGAAGATAACCAAAATAAAGAAGAAAAAAGTGGGCAATAACGAGCTCCCGACTATCACTCTTTGTCAGTTTCTAAAAATGGCAAAAGACGGGTTTTGGTAG 720 42.92 MASPDVFLHLFHLTKGDTKSRGLAFEKKIEYLESLNDRVSNRRARRWINDRILLELVPRLTGDEIRGLFAPPPWGDKARPSPFSMTNVGEWDKFRNIDMDEEAGEIEALKGSSSKKKSHADADKLAALTNWHRVDCKTRDAFRRSFLPELVDGYEEKIRAFVSETGGKEVLVIRVQDPFHRLLFHGVCEFYNLVSTTESETEGAKVLKITKIKKKKVGNNELPTITLCQFLKMAKDGFW 239
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01362 239 Pfam R3H-associated N-terminal domain 26 144 IPR025952 -
Bial10g01362 239 PANTHER R3H DOMAIN-CONTAINING PROTEIN 4 18 237 IPR039629 -
Bial10g01362 239 SUPERFAMILY R3H domain 131 216 IPR036867 GO:0003676(InterPro)
Bial10g01362 239 CDD R3H 151 203 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01362 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
361565 Bial10g01362 Bial12g02766
361566 Bial10g01362 Bial24g02609
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13637955 Bial12g02766 Bial-Chr12:57732317 wgd
Bial Bial-Chr10:13637955 Bial22g00957 Bial-Chr22:9225892 wgd
Bial Bial-Chr10:13637955 Bial24g02609 Bial-Chr24:56841262 wgd