Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01370 | ATGAAGAAATTGCAACATGGAATATTCTTCGAATCGAAAACCCAACGTCTATTTAACCCCCACCCCGCAATAATAATAATAAGTCATCACCCTCCCTTTACCATCTGCGTTGAATATTTCATTTCGTCATCAATCAACCCAAACCCTAACCCCCAAATTCGACCAAATTGCAGTCAAATTATGGGCCAGCCGTGTACGGAGCCATCGGGTCCATCCACATCGTCATCGATCACCGAAACAGTGAACGGCGAGCACGATTTCCGGATCTCGGGTTATTCGTTTCTAAAGGGTTTAGGGATCGGTAAATACGTGGCGTCTGATACGTTTAACGTTGGTGGGTATTCATGGGCGGTGTATTTTTACCCGGATGGTAAGAGTACGGAGGATAACGCTAGTTATGTGTCGTTGTTTATTGCGTTGGCGAGTGACGGGTCGGATGTTCGGGCGTTGTTTGAGTTGACTTTGATTGACCAGAGTGGGAATGAGAGGCATAAGGTTCATACTCATTTCGGTAGAGCGTTGGAGAGCGGGCCGTATACGCTTAAGTACCGCGGGAGTATGTGGGGATACAAGCGTTTTTTCAAAAGATCTACTTTAGAAGGATCAGACTATCTAAAAGACAACTGCCTTCAAGTTCATTGCTGTGTTGGCGTTGTCCGGTCCCACACAGAGGGTCCTAAATCCTACTCTATTCATGTGCCCCCTTCTGATATCGGGCAGCACTTCGGGCAACTTCTTGAGTGTGGAAAGGGCACTGATGTTTCCTTTGAAGTAAATGGAGAAACCTTTGCTGCCCATAAATTGGTTCTTGCAGCCCGCTCACCAGTTTTCCGGGCCCAACTTTTTGGCCCAATGAAAGACCCAAATTCCCATTGCATCAAAGTTGAAGACGTCGAAGCCCCTGTTTTTAAGGCATTACTTCATTTTATATACTGGGATAAACTGCCCGACATGGAAGAGTTAACGGGCCTGAATACAAAATGGGCTTCAACATTGATGTATCAGCATTTGCTTGCAGCTGCTGACCGATACGGGTTAGAGAGGCTTTGTATTTTATGTGAATCTAATCTATGTGAAGATGTTGCCATTAATACAGTTGCCACAACATTAGCATTGGCTGAACAACATCATTGTCTTCAGTTGAAATCCGTGTGTCTTAAGTTTGTTTCTTTGCCCGAGAATCTCAGAGCTGTGATGCAGACAGACGGTTTTGACTACTTAAAAGAAAGCTGCCCGCATGTGTTGACTGAGCTACTGGAACACGTGGCCAGAAACAACGAGCATTCTCTAGCGGTTTGCAGTCACCCAAATGCGATCATACTCGACGGAAGTGATGTTCATGGTAGACGGGTTAAACCCAGGCTGTAG | 1368 | 45.61 | MKKLQHGIFFESKTQRLFNPHPAIIIISHHPPFTICVEYFISSSINPNPNPQIRPNCSQIMGQPCTEPSGPSTSSSITETVNGEHDFRISGYSFLKGLGIGKYVASDTFNVGGYSWAVYFYPDGKSTEDNASYVSLFIALASDGSDVRALFELTLIDQSGNERHKVHTHFGRALESGPYTLKYRGSMWGYKRFFKRSTLEGSDYLKDNCLQVHCCVGVVRSHTEGPKSYSIHVPPSDIGQHFGQLLECGKGTDVSFEVNGETFAAHKLVLAARSPVFRAQLFGPMKDPNSHCIKVEDVEAPVFKALLHFIYWDKLPDMEELTGLNTKWASTLMYQHLLAAADRYGLERLCILCESNLCEDVAINTVATTLALAEQHHCLQLKSVCLKFVSLPENLRAVMQTDGFDYLKESCPHVLTELLEHVARNNEHSLAVCSHPNAIILDGSDVHGRRVKPRL | 455 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01370 | 455 | CDD | BTB-POZ-BPM-plant | 238 | 358 | - | - | |
| Bial10g01370 | 455 | FunFam | BTB-POZ and math domain 1 | 228 | 355 | - | - | |
| Bial10g01370 | 455 | ProSiteProfiles | MATH-TRAF domain profile. | 82 | 216 | IPR002083 | GO:0005515(InterPro) | |
| Bial10g01370 | 455 | SMART | BTB-4 | 252 | 361 | IPR000210 | GO:0005515(InterPro) | |
| Bial10g01370 | 455 | SUPERFAMILY | TRAF domain-like | 79 | 218 | - | - | |
| Bial10g01370 | 455 | Pfam | BTB-POZ domain | 242 | 359 | IPR000210 | GO:0005515(InterPro) | |
| Bial10g01370 | 455 | CDD | MATH | 83 | 216 | IPR002083 | GO:0005515(InterPro) | |
| Bial10g01370 | 455 | SMART | math-3 | 87 | 199 | IPR002083 | GO:0005515(InterPro) | |
| Bial10g01370 | 455 | Gene3D | Potassium Channel Kv1.1; Chain A | 228 | 356 | IPR011333 | - | |
| Bial10g01370 | 455 | PANTHER | BTB-POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 | 73 | 423 | IPR045005 | GO:0016567(InterPro) | |
| Bial10g01370 | 455 | CDD | BACK-AtBPM-like | 358 | 420 | IPR034090 | - | |
| Bial10g01370 | 455 | Gene3D | - | 361 | 436 | - | - | |
| Bial10g01370 | 455 | ProSiteProfiles | BTB domain profile. | 252 | 319 | IPR000210 | GO:0005515(InterPro) | |
| Bial10g01370 | 455 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 81 | 220 | IPR008974 | GO:0005515(InterPro) | |
| Bial10g01370 | 455 | SUPERFAMILY | POZ domain | 229 | 359 | IPR011333 | - | |
| Bial10g01370 | 455 | Pfam | MATH domain | 85 | 216 | IPR002083 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01370 | K10523 | speckle-type POZ protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 361570 | Bial10g01370 | Bial12g02770 | |
| 361571 | Bial10g01370 | Bial24g02613 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:13699504 | Bial24g02612 | Bial-Chr24:56862205 | dispersed | |
| Bial | Bial-Chr10:13699504 | Bial12g02769 | Bial-Chr12:57755961 | wgd | |
| Bial | Bial-Chr10:13699504 | Bial22g00964 | Bial-Chr22:9271915 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Bial | BTB | 7.6e-25 | CL0033 | TR | TRAF |