Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01391 | ATGGAGTCACCTCACAGCCACATGCGTTCAATCAAGCTATGGCCACCTAGCCACAGCACGAGGTTATTGCTCGTCGAGCGCATAATAAGAAACCTCACAACACCATCAATATTATCAAGAAAATACGGTTTGTTAAGTAAAGAAGAAGCCGAAGAAGAGGCCAAACTAATCGAATCAGCAGGGTATAATGCAGCTACCCAACACTTTGAAAAAGATCCGCAAACTGACGGTGGATCAGCAGTTCAAGTTTATGCCAAAGAAGCTAGTAGACTAATGGTGGAATTCATCAAAACCGGGCCCAAACCGAAAGAACATAGAGAAAGTGTGCCGGAAATAATCGCATCAGATCATGTTTTCGATATTTCTGGTGGTCGTCGCGCGTTTATTGAGGCGGAAGAAGCGAAGGAGCTGTTAAAACCGTTAAAAGAGCCTGGAAACAAGTTTACAAAAATATGTTTTAGTAACCGAAGCTTTGGGTTACCCGCAGCCCACGTGGCTGCATCGGTTTTGTCTAGTGTTAAAGATCAGTTGACCGAAGTTGACTTATCGGACATTGTGTCGAGGAGGCCCGAGCCTGAAGCGGTTGAGGTTATGAGGATGTTTTCGTCGGCTCTTGAAGGGTGTGGGTTGAGTTATTTGAATTTGTCTAATAATGTGTTGAATGAAAAAGGGGTTAGGGCATTTGGGGGTCTTTTGAAGTCTCAAAGTAATCTTGTGGAGTTGTATTTGGAGAATGCTGGGATCTCACCCGAGGCTGCGAAGGCGGTTTGCGAGTTGGTTCCCACGACTAGTAAACTTAAGCTTCTTCATTTCCATCATAATAAAACAGGGGATGAAGGTGCGGTCGCAATTTCTAAACTCGTGAAAGGGTGTCCGAATCTCGAGGATTTCAGGTGTTCGTCCACACGGGTCGGGTCAGTAGGAGGAATGGCTCTAGCAGAAGCCCTTAAAACATGTACACTTTTAAAGAAACTCGACTTACGTGACAACATGTTTGGACCAAAAGCCGGTGTCACATTGAGTAATAGCCTATCCGTGCACACTAATATCACTGAAATTTACTTAAGTAACATGAATTTAGAAAACGAGGGTGTGATCGCAATAGCAAACGCACTAAAAACTTCGAACTCAGCCCTTGAAATCATCGAGATGGCAGGAAACAACATCAGTTCTGAAGCAGCAAATGCTTTAGCAGATTGCATAGTTTCAAAGAAACATTCTATAACCAAAATAAACTTATCCGAGAATGAACTAAAAGATGAAGGTGCCATCGTGATTGCAAAGGCGCTCGAAGGCGAGTTTGGACGATTATGTATCGTTGATATGAGTGCAAACAAGATCAAAACAGATGGAGCTATGGCATTGGCTAAAGCAGTTGTGGGTAAATTCGGGTTTCGGTTGTTGAATATTAATGGAAACTTGTTATCCAATAAAGGAATTGAAGGTGTGAGAGAGATCTTCAAGAGCTTCCCGCGTATGCTCGGGCCATTCGATGAGAATGATCCTCATGGTGAGGATGGTTCTAATGAGGTTGAATCAAAGCTGAAAGATGTTGAAAAGAAGCAAAAAGAATAG | 1575 | 43.05 | MESPHSHMRSIKLWPPSHSTRLLLVERIIRNLTTPSILSRKYGLLSKEEAEEEAKLIESAGYNAATQHFEKDPQTDGGSAVQVYAKEASRLMVEFIKTGPKPKEHRESVPEIIASDHVFDISGGRRAFIEAEEAKELLKPLKEPGNKFTKICFSNRSFGLPAAHVAASVLSSVKDQLTEVDLSDIVSRRPEPEAVEVMRMFSSALEGCGLSYLNLSNNVLNEKGVRAFGGLLKSQSNLVELYLENAGISPEAAKAVCELVPTTSKLKLLHFHHNKTGDEGAVAISKLVKGCPNLEDFRCSSTRVGSVGGMALAEALKTCTLLKKLDLRDNMFGPKAGVTLSNSLSVHTNITEIYLSNMNLENEGVIAIANALKTSNSALEIIEMAGNNISSEAANALADCIVSKKHSITKINLSENELKDEGAIVIAKALEGEFGRLCIVDMSANKIKTDGAMALAKAVVGKFGFRLLNINGNLLSNKGIEGVREIFKSFPRMLGPFDENDPHGEDGSNEVESKLKDVEKKQKE | 524 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01391 | 524 | Gene3D | WPP domain | 10 | 108 | IPR038214 | - | |
| Bial10g01391 | 524 | MobiDBLite | consensus disorder prediction | 497 | 524 | - | - | |
| Bial10g01391 | 524 | Gene3D | Ribonuclease Inhibitor | 117 | 524 | IPR032675 | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 462 | 489 | - | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 207 | 234 | - | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 376 | 403 | - | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 291 | 318 | - | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 319 | 346 | - | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 235 | 262 | - | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 347 | 374 | - | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 405 | 432 | - | - | |
| Bial10g01391 | 524 | SMART | LRR-RI-2 | 263 | 290 | - | - | |
| Bial10g01391 | 524 | PANTHER | RAN GTPASE-ACTIVATING PROTEIN 1 | 3 | 518 | IPR045203 | GO:0005096(InterPro) | |
| Bial10g01391 | 524 | MobiDBLite | consensus disorder prediction | 498 | 524 | - | - | |
| Bial10g01391 | 524 | Pfam | WPP domain | 10 | 105 | IPR025265 | - | |
| Bial10g01391 | 524 | SUPERFAMILY | RNI-like | 128 | 515 | - | - | |
| Bial10g01391 | 524 | Pfam | Leucine Rich repeat | 405 | 427 | IPR001611 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01391 | K14319 | Ran GTPase-activating protein 1 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 24043 | Bial10g01391 | Bial16g00884 | |
| 24044 | Bial10g01391 | Bial4g01040 | |
| 361585 | Bial10g01391 | Bial12g02710 | |
| 361586 | Bial10g01391 | Bial24g02553 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:13955479 | Bial12g02710 | Bial-Chr12:57299723 | dispersed | |
| Bial | Bial-Chr10:13955479 | Bial16g00884 | Bial-Chr16:11119567 | wgd | |
| Bial | Bial-Chr10:13955479 | Bial22g00982 | Bial-Chr22:9607734 | wgd | |
| Bial | Bial-Chr10:13955479 | Bial24g02553 | Bial-Chr24:56363121 | wgd | |
| Bial | Bial-Chr10:13955479 | Bial4g01040 | Bial-Chr4:12804721 | wgd |