AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01392 ATGGAAGCTTCAACAACCTCCGCTATTTGTTTTGGTATGGAATCCTTAGGGCTTGAAACTGACATCCCGAGCTCAAAAACGTACTATAACCTAGGATTGAAGCAAACATCTAAGCAAAACCATGGGAATCCTAAAGTTTTGTCACTTTTGTCATCAATTCTTGAGAGGTCGGTCCAAATGAACGAGACGTTACTCGATAAGGCACAAACGAAAGATGTAATAACGGTTTTTCATGGTTCAAGGGCGCCGGGACTCAGCATTAAAGAGTACATTGATAGAATATTCAAGTACTCGCACTGCAGCCCCTCGTGCTTCGTTGTCGCGCAAGTTTACATGGATCGGTTTATTCAGTGCGGAAATGTTAATTTGACTTCTTTAAGTGTGCATCGGCTTCTCATTACTAGTGTAATGCTTGCGGCCAAGTTCATTGATGACGCATTCTACAACAACGCTTATTATGCAAAAGTGGGAGGAGTAACAACAGCAGAAATGAACAGATTGGAGATGAAATTTCTATTTGGTTTGGACTTTCGGCTCCACATCAGTGTCGGGACGTTTGGCAGATACTGTTCTCAATTGGAGAAACAAGTGTCATGTGAACTGCAAGTTGAAAGACCGCCACGGGTGATTCACGCCCCGTGTGGACTTAAAGAATCTTGGTCCAGTAGTGAAGACTCGAGTACGTACACTACAACAGAGATACATATCGTATAG 714 42.86 MEASTTSAICFGMESLGLETDIPSSKTYYNLGLKQTSKQNHGNPKVLSLLSSILERSVQMNETLLDKAQTKDVITVFHGSRAPGLSIKEYIDRIFKYSHCSPSCFVVAQVYMDRFIQCGNVNLTSLSVHRLLITSVMLAAKFIDDAFYNNAYYAKVGGVTTAEMNRLEMKFLFGLDFRLHISVGTFGRYCSQLEKQVSCELQVERPPRVIHAPCGLKESWSSSEDSSTYTTTEIHIV 237
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01392 237 Pfam Cyclin 65 179 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Bial10g01392 237 SUPERFAMILY Cyclin-like 89 180 IPR036915 -
Bial10g01392 237 Gene3D - 34 227 - -
Bial10g01392 237 PANTHER UNCHARACTERIZED 36 213 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01392 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
24045 Bial10g01392 Bial17g00215
24046 Bial10g01392 Bial5g00977
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13986180 Bial6g00730 Bial-Chr6:11256360 dispersed
Bial Bial-Chr10:13986180 Bial17g00215 Bial-Chr17:4046964 wgd
Bial Bial-Chr10:13986180 Bial22g00983 Bial-Chr22:9613441 wgd
Bial Bial-Chr10:13986180 Bial5g00977 Bial-Chr5:13986119 wgd