AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01400 ATGGATTCCAATTCCATTCTTCCTCTTCTCTCACTACCTTCATCCAAACGCTCCAAATCCAATTCCAATTCCAGTTCCATGGACGCTCTGCTAACCTCCTTCCTATCACTCTCCGATTCGCCCTCAATTCACACTTCCTTTGACCGCTTGATTCAGTCCACGGTTTCCGATTCCGATCAGAACCGCTTGATTCAACGCGCGCTGCGGCTCGGAACGGTGTTGCTGGAAGCTGGTAACAGATCGGCTAGGAGATGTTCGTCTGTTCATAACGCCGTTGTGTGGCCGTTATCGCCGGATCTTACTGTTAAGATTTTTTCAATGCTTGATACACAAAGTGTGTGTTATGTTGCGGCTACATGCTCATTTTTTCAGAAGTGTGCTATGGATCCTTTGTGTTTTGCTAACATTGACTTGGCTACATTAGTCCCTAAAGTCAACAATGCTGTGGTGTCAACTATGATCAATCGAGCCGGAGATGCACTCAGGTCTATAAGGCTTGGTGTATTGCCAGCCATTCCTGCTGCACCATTCTTTTCTTCTCAACCATTAGTTTATAGCATTAGGAATGCAAATGATGCATCGGGATATTCATGGAATGATAAGATATCAAGGCAAGGAAAGGAATCTTCCATTTTAACAAGGTCCTGTTTGAATTCTTTGAGTGGAAATGGTGGTGCACCTGGGTACGGGTTTCATTTGAGAAGATTACATCTTTACAACATTGAAAGAATGGACAATGCATCCCTCTTGACATCATTATCAGCTTGCCCAAATCTCCTAGATCTAGAAATTGTGGGCCTGCATGTTGAATTGAGGCATACGTTGGAGTCAGTAAGTAGAAATTGTCCCTTGATAGAACGTTTGGTTTTTGAATCTTCAAAAACAGGTAGAGATGACGGTCTGAAATTCCCAACCTGCAATGAGTTTGTCCTCAACTGTCCTAACATAACCACTTTAGCACTTAAAGGATTTAAGTTACATGATTACAAGGCTCGTATGCTGGTAAAGGGGTTACGAAAATTGAAACATCTTGATCTTTCAACATCTTACTCATTCACTGGTGCTTTTTTAAAGAATGTTAGTGGCAATGGTGGCGGTGATAATTTGGAGGTGATGATTTTACGGGACTGCATGCATCTAAAGGAAAGTGAAGTCGGGCGGTTTATTGCAGCTGTTCTCGCTGGGGAGTTCAGGCTCCTTAGATATCTTGATATATCTAACAGGGAGGGTCTAGCATGCGAGGGCGACTGGAACACTAGATGTTACAATGCTAGTTTTATTCCTATACCGCAATTATTAGAACAGAGGCCTGATTTCTGTCTGGTAGTTGAATTCCCAAAAGGAAGTTATATGGACACTGATCAAATGACAGGCAGTGATGTAAGTTTACCATCACCGTCAAGCAGTAGCCACACATCTGATGGATCAAGCACATCAGACGGAAGTTATAATAGTGATCACGGTAGTGGTGGTTATGTTATCGACGAAGAAAACTCGGACTACCTACTGAGTTGA 1515 42.77 MDSNSILPLLSLPSSKRSKSNSNSSSMDALLTSFLSLSDSPSIHTSFDRLIQSTVSDSDQNRLIQRALRLGTVLLEAGNRSARRCSSVHNAVVWPLSPDLTVKIFSMLDTQSVCYVAATCSFFQKCAMDPLCFANIDLATLVPKVNNAVVSTMINRAGDALRSIRLGVLPAIPAAPFFSSQPLVYSIRNANDASGYSWNDKISRQGKESSILTRSCLNSLSGNGGAPGYGFHLRRLHLYNIERMDNASLLTSLSACPNLLDLEIVGLHVELRHTLESVSRNCPLIERLVFESSKTGRDDGLKFPTCNEFVLNCPNITTLALKGFKLHDYKARMLVKGLRKLKHLDLSTSYSFTGAFLKNVSGNGGGDNLEVMILRDCMHLKESEVGRFIAAVLAGEFRLLRYLDISNREGLACEGDWNTRCYNASFIPIPQLLEQRPDFCLVVEFPKGSYMDTDQMTGSDVSLPSPSSSSHTSDGSSTSDGSYNSDHGSGGYVIDEENSDYLLS 504
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01400 504 MobiDBLite consensus disorder prediction 454 486 - -
Bial10g01400 504 Gene3D Ribonuclease Inhibitor 90 385 IPR032675 -
Bial10g01400 504 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 96 380 - -
Bial10g01400 504 MobiDBLite consensus disorder prediction 454 504 - -
Bial10g01400 504 SUPERFAMILY F-box domain 86 138 IPR036047 GO:0005515(InterPro)
Bial10g01400 504 SUPERFAMILY RNI-like 231 407 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01400 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:14062220 Bial14g01699 Bial-Chr14:44817062 dispersed