Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01418 | ATGACAATGACCGCCGTCGACGTGGACACATTGATGTCCGATTTCCTCCGGAAGTCCGGCGGTGTAGCGTTAATCGACGGAGGACTTGCGACGGAGCTTGAACGGTACGGCGCCGACCTTAACGATCCTCTATGGAGCGCTAAATGTCTCCTCACTTCTACTCACCTTATTCGTCAGGTACACCTTGATTATCTTGAAGCTGGTGCAGATATAATAATCACAGCATCTTACCAGGCCACAATTCAAGGGTTTGAGGCTAAAGGCTATTCCACAGAAGTTGGTGAGTCTATGCTTAGAAAGAGTGTAGAGATTGCATGTGAAGCAAGGGATTTATATCTCCAAAGATGCCATGAATCTTCTGTTGATTGTACTGGTGATGGTAGGATTTTCAAAACTCGTCCCATTTTAGTTGCTGCATCTGTTGGGAGTTATGGGGCTTATCTTGCCGATGGTTCTGAATACAGTGGGGACTATGGTGATGCAATGAATTTGGAATTCTTGAAAAATTTTCACAGAAGAAGGGTCCAAGTTTTAGCTGAATCTGGTGCTGATTTGATAGCATTTGAAACAATTCCAAATAAGCTAGAAGCACAGGCATTTTGTGAGCTTCTTGAAGAAGGCATTAATATTCCTGCATGGTTTGCATTTAACTCCAAAGATGGTGTGAATGTTGTGAGTGGGGATTCTTTATCCGAATGTGCCGCAATTGCTGATTCATGCAAGAAAGTGGTTTCTGTAGGAATCAACTGCACCCCTCCTAGATTCATTGGTGGATTGATTTCCACAATAAAAAAGGTGACAAATAAACCAATCCTTATATATCCTAACAGTGGTGAAAGCTATGATGGTCAACTAAAACAATGGGTGCAAAACACTGGAGTTCTAGAAGAGGATTTTGTTTCATATGTGAACACATGGTGTGAGATGGGTGCATCACTTGTTGGAGGATGTTGTAGAACTACACCTGACACAATTAGAGCCATTCACAAAATTCTTCCAAGCAGATCGGTCTCTACACCTGTCGTTGAAGCCCTTCAAAGTGAGTCGGGACGTGTGATGATCAAAACCGCATAG | 1074 | 42.92 | MTMTAVDVDTLMSDFLRKSGGVALIDGGLATELERYGADLNDPLWSAKCLLTSTHLIRQVHLDYLEAGADIIITASYQATIQGFEAKGYSTEVGESMLRKSVEIACEARDLYLQRCHESSVDCTGDGRIFKTRPILVAASVGSYGAYLADGSEYSGDYGDAMNLEFLKNFHRRRVQVLAESGADLIAFETIPNKLEAQAFCELLEEGINIPAWFAFNSKDGVNVVSGDSLSECAAIADSCKKVVSVGINCTPPRFIGGLISTIKKVTNKPILIYPNSGESYDGQLKQWVQNTGVLEEDFVSYVNTWCEMGASLVGGCCRTTPDTIRAIHKILPSRSVSTPVVEALQSESGRVMIKTA | 357 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01418 | 357 | PANTHER | ZGC:172121 | 14 | 333 | IPR051486 | GO:0008898(PANTHER)|GO:0009086(PANTHER)|GO:0033528(PANTHER) | |
| Bial10g01418 | 357 | FunFam | Homocysteine S-methyltransferase | 12 | 331 | - | - | |
| Bial10g01418 | 357 | PIRSF | BHMT | 289 | 353 | IPR017226 | GO:0008168(InterPro)|GO:0008270(InterPro)|GO:0009086(InterPro) | |
| Bial10g01418 | 357 | PIRSF | BHMT | 12 | 120 | IPR017226 | GO:0008168(InterPro)|GO:0008270(InterPro)|GO:0009086(InterPro) | |
| Bial10g01418 | 357 | PIRSF | BHMT | 136 | 247 | IPR017226 | GO:0008168(InterPro)|GO:0008270(InterPro)|GO:0009086(InterPro) | |
| Bial10g01418 | 357 | Gene3D | - | 12 | 330 | IPR036589 | - | |
| Bial10g01418 | 357 | SUPERFAMILY | Homocysteine S-methyltransferase | 19 | 335 | IPR036589 | - | |
| Bial10g01418 | 357 | Pfam | Homocysteine S-methyltransferase | 24 | 331 | IPR003726 | - | |
| Bial10g01418 | 357 | ProSiteProfiles | Homocysteine-binding domain profile. | 11 | 332 | IPR003726 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01418 | K00547 | homocysteine S-methyltransferase [EC:2.1.1.10] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 24062 | Bial10g01418 | Bial17g00233 | |
| 24063 | Bial10g01418 | Bial5g00960 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:14237345 | Bial2g03094 | Bial-Chr2:82455795 | dispersed | |
| Bial | Bial-Chr10:14237345 | Bial17g00233 | Bial-Chr17:4214407 | wgd | |
| Bial | Bial-Chr10:14237345 | Bial5g00960 | Bial-Chr5:13711988 | wgd |