AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial10g01430 | ATGATGTTTTCATCATCAGTTTATTCCACAAGCAATAAAACCTCAACTTCTTTATCTGATCAAGATGCTGCTACCAGCACTGTGATTACAAGCAAGAATATTCATCATGATCAATTCACTCCATCAATCACACTTTCTTCAATTTCAAATCATACTCAAGATCAACATGATCACCTCTATCCTAGTCCTCAAAAGATCAAGAAAAAGAGAAACCTCCCAGGAAATCCAGATCCAGATGCAGAAGTGATAGCATTATCACCAAAAACACTGATGGCAACCAACAGATTTGTGTGTGAGATATGCAACAAAGGGTTTCAAAGAGATCAAAACCTGCAACTCCACAGAAGAGGTCATAACCTGCCATGGAAACTGAAGCAAAGAAACAACAAAGATGAGATCAAGAAAAGAGCTTATGTGTGCCCTGAACCAAGTTGTGTGCACCACCACCCTTCTAGGGCTCTTGGGGATCTGACTGGGATCAAGAAACACTTTTGTAGAAAACATGGTGAAAAGAAGTGGAAGTGTGACAAGTGTTCTAAGATCTATGCAGTTCAGTCTGATTGGAAAGCACATTCTAAAACTTGTGGCACTAGAGAGTATAGATGTGATTGTGGAACTCTATTTTCCAGGAAGGATAGCTTCATTACTCACAGAGCCTTCTGTGATGCCTTGGCTGAAGAAACTGCCAGACTCTCAGCTGCAGCTGCAGCAGCTGCAATTTCACTACCTAACAATCACCACCCTTCTATTATCCCCAATCTTACACAAACACCCTTCAACATTCAACTACCTTCACAAAACCCCCCTTCTTCCCTTTTTCATTTCAATCACAACCTAAACCCTACTTGGGTGGACCCCAACCCAACCCGAATCAAACCCGAAACCATCCACCACCCCCACCAATTAATTCCCACCATTTCCTTACCGTATTACCAGGAACACGATAAGGAAATGATGATCATTTCCAGGCCGCCACCGCTATTTCACGGCGGTGGTGGCCATATGTCCGCCACCGCATTGCTGCAGAAGGCTGCGACGGTGGGTGCGGTGGCGGACCACGTGGGGTCCACGATGGGCGGGTTGGATATGGGTGAATTTGCCCACGTGACAACTGCCGTCATGCCAGCATACCACCAGCACGTGGGCATGACGTCAGGGAATATTGCCACGTGGCAAAAGACTGACCGTTTGACCCGGGATTTTCTTGGGTTGACCGGGGATCAAGAGGTTGACCATCATGGTGGTGGGGTCGAGGCTAACGTGAACGTTAGGGGTATGCTAGCGTACACCGGGGGTATAGAGATCCCAGCCGATGGAGGGTTTGGTACAAGCGCGTCGGAAGCTTGGGGCAATTGTTAA | 1359 | 46.65 | MMFSSSVYSTSNKTSTSLSDQDAATSTVITSKNIHHDQFTPSITLSSISNHTQDQHDHLYPSPQKIKKKRNLPGNPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKDEIKKRAYVCPEPSCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEETARLSAAAAAAAISLPNNHHPSIIPNLTQTPFNIQLPSQNPPSSLFHFNHNLNPTWVDPNPTRIKPETIHHPHQLIPTISLPYYQEHDKEMMIISRPPPLFHGGGGHMSATALLQKAATVGAVADHVGSTMGGLDMGEFAHVTTAVMPAYHQHVGMTSGNIATWQKTDRLTRDFLGLTGDQEVDHHGGGVEANVNVRGMLAYTGGIEIPADGGFGTSASEAWGNC | 452 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial10g01430 | 452 | FunFam | protein indeterminate-domain 5, chloroplastic-like | 151 | 230 | - | - | |
| Bial10g01430 | 452 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 98 | 118 | IPR013087 | - | |
| Bial10g01430 | 452 | Pfam | BIRD-IDD transcription factor, fourth C2HC zinc finger | 199 | 236 | - | - | |
| Bial10g01430 | 452 | SUPERFAMILY | beta-beta-alpha zinc fingers | 95 | 193 | IPR036236 | - | |
| Bial10g01430 | 452 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 172 | 196 | - | - | |
| Bial10g01430 | 452 | Gene3D | Classic Zinc Finger | 75 | 144 | - | - | |
| Bial10g01430 | 452 | Gene3D | Classic Zinc Finger | 166 | 232 | - | - | |
| Bial10g01430 | 452 | MobiDBLite | consensus disorder prediction | 58 | 75 | - | - | |
| Bial10g01430 | 452 | Pfam | BIRD-IDD transcription factor, second C2H2 zinc finger | 134 | 168 | - | - | |
| Bial10g01430 | 452 | SMART | c2h2final6 | 173 | 193 | IPR013087 | - | |
| Bial10g01430 | 452 | SMART | c2h2final6 | 96 | 118 | IPR013087 | - | |
| Bial10g01430 | 452 | MobiDBLite | consensus disorder prediction | 50 | 77 | - | - | |
| Bial10g01430 | 452 | Pfam | Zinc finger, C2H2 type | 96 | 118 | IPR013087 | - | |
| Bial10g01430 | 452 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 96 | 118 | IPR013087 | - | |
| Bial10g01430 | 452 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Bial10g01430 | 452 | PANTHER | SERINE-THREONINE-PROTEIN KINASE RIO | 51 | 408 | IPR031140 | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
| Bial10g01430 | 452 | FunFam | protein indeterminate-domain 12-like | 75 | 144 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial10g01430 | K25870 | zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:14393683 | Bial12g01920 | Bial-Chr12:49436002 | dispersed | |
| Bial | Bial-Chr10:14393683 | Bial13g02344 | Bial-Chr13:32999611 | transposed | |
| Bial | Bial-Chr10:14393683 | Bial1g02096 | Bial-Chr1:29086605 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Bial3g00839 | . | 23 | 174 | IDZ gene family | AT5G66730 | 78.947 | 2.12e-90 | 272.0 | |
| Bial3g00840 | . | 23 | 194 | IDZ gene family | AT5G66730 | 80.233 | 3.58e-104 | 317.0 | |
| Bial2g00948 | . | 37 | 498 | IDZ gene family | AT1G03840 | 52.311 | 2.87e-146 | 425.0 | |
| Bial2g02309 | . | 17 | 339 | IDZ gene family | AT1G55110 | 54.464 | 8.08e-113 | 338.0 | |
| Bial12g02753 | ACH,BST,WGDA | 26 | 65 | IDZ gene family | AT5G44160 | 70.0 | 6.80e-10 | 58.9 | |
| Bial23g02220 | . | 262 | 426 | IDZ gene family | AT3G50700 | 36.508 | 4.90e-14 | 70.9 | |
| Bial13g02344 | . | 21 | 339 | IDZ gene family | AT1G55110 | 57.059 | 7.42e-116 | 347.0 | |
| Bial13g01064 | . | 49 | 255 | IDZ gene family | AT5G03150 | 74.519 | 2.25e-111 | 335.0 | |
| Bial12g01920 | . | 38 | 203 | IDZ gene family | AT1G03840 | 89.222 | 2.07e-111 | 336.0 | |
| Bial1g00905 | . | 49 | 255 | IDZ gene family | AT5G03150 | 75.481 | 3.23e-115 | 345.0 | |
| Bial1g02698 | . | 194 | 386 | IDZ gene family | AT1G55110 | 34.715 | 4.83e-12 | 63.9 | |
| Bial1g02696 | . | 23 | 174 | IDZ gene family | AT5G66730 | 78.289 | 2.15e-91 | 275.0 | |
| Bial24g02598 | ACH,BST,WGDA | 26 | 65 | IDZ gene family | AT5G44160 | 70.0 | 7.50e-10 | 58.9 | |
| Bial24g02947 | . | 49 | 219 | IDZ gene family | AT5G03150 | 86.55 | 5.72e-112 | 338.0 | |
| Bial22g02154 | . | 49 | 220 | IDZ gene family | AT5G03150 | 88.953 | 4.55e-114 | 343.0 | |
| Bial2g02934 | . | 61 | 178 | IDZ gene family | AT2G02070 | 55.833 | 6.72e-40 | 148.0 | |
| Bial11g02395 | . | 3 | 434 | IDZ gene family | AT3G50700 | 47.782 | 2.31e-128 | 379.0 | |
| Bial9g02300 | . | 197 | 283 | IDZ gene family | AT4G02670 | 39.773 | 2.59e-07 | 48.5 | |
| Bial17g00141 | . | 38 | 205 | IDZ gene family | AT1G03840 | 81.065 | 1.01e-101 | 305.0 | |
| Bial14g00643 | . | 37 | 498 | IDZ gene family | AT1G03840 | 49.304 | 6.22e-138 | 405.0 | |
| Bial19g01386 | . | 1 | 497 | IDZ gene family | AT5G66730 | 52.574 | 1.81e-156 | 453.0 | |
| Bial19g01865 | . | 38 | 420 | IDZ gene family | AT3G45260 | 48.558 | 4.91e-110 | 330.0 | |
| Bial19g01973 | . | 50 | 503 | IDZ gene family | AT5G03150 | 50.83 | 6.18e-142 | 415.0 | |
| Bial10g02531 | . | 49 | 220 | IDZ gene family | AT5G03150 | 88.953 | 3.58e-114 | 343.0 | |
| Bial10g01430 | . | 40 | 374 | IDZ gene family | AT4G02670 | 52.228 | 2.41e-128 | 375.0 | |
| Bial5g00227 | . | 61 | 419 | IDZ gene family | AT1G55110 | 50.815 | 1.29e-106 | 319.0 | |
| Bial5g01045 | . | 38 | 137 | IDZ gene family | AT1G03840 | 85.0 | 1.03e-59 | 190.0 | |
| Bial7g01295 | . | 50 | 503 | IDZ gene family | AT5G03150 | 51.037 | 2.69e-142 | 416.0 | |
| Bial7g01859 | . | 7 | 497 | IDZ gene family | AT5G66730 | 52.731 | 1.03e-153 | 446.0 | |
| Bial17g01772 | . | 21 | 339 | IDZ gene family | AT1G55110 | 54.683 | 6.60e-112 | 335.0 | |
| Bial17g02737 | . | 61 | 419 | IDZ gene family | AT1G55110 | 50.543 | 3.66e-106 | 318.0 | |
| Bial24g01792 | . | 53 | 301 | IDZ gene family | AT4G02670 | 64.453 | 2.30e-111 | 333.0 | |
| Bial15g01985 | . | 21 | 340 | IDZ gene family | AT1G55110 | 56.034 | 2.46e-116 | 348.0 | |
| Bial15g00777 | . | 25 | 349 | IDZ gene family | AT3G50700 | 52.134 | 6.88e-106 | 322.0 | |
| Bial18g00391 | . | 73 | 198 | IDZ gene family | AT1G55110 | 54.688 | 6.27e-46 | 161.0 | |
| Bial3g01799 | . | 21 | 340 | IDZ gene family | AT1G55110 | 57.895 | 2.98e-118 | 353.0 | |
| Bial1g02096 | . | 17 | 339 | IDZ gene family | AT1G55110 | 56.686 | 2.43e-119 | 356.0 | |
| Bial12g03123 | . | 49 | 219 | IDZ gene family | AT5G03150 | 86.55 | 5.72e-112 | 338.0 | |
| Bial10g00067 | . | 148 | 497 | IDZ gene family | AT5G66730 | 45.974 | 5.22e-61 | 207.0 | |
| Bial10g00373 | . | 49 | 265 | IDZ gene family | AT5G03150 | 68.122 | 4.98e-111 | 334.0 | |
| Bial23g02690 | . | 17 | 337 | IDZ gene family | AT1G55110 | 55.793 | 3.88e-113 | 340.0 | |
| Bial10g00506 | . | 50 | 503 | IDZ gene family | AT5G03150 | 49.795 | 1.38e-139 | 408.0 | |
| Bial13g02917 | . | 28 | 347 | IDZ gene family | AT3G50700 | 52.96 | 8.95e-109 | 327.0 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Bial | zf-C2H2 | 0.0045 | CL0361 | TF | C2H2 |