AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01440 ATGGCTTCTTCAATAATATCCGGAGCTAATCATCTCTCATTCGCCTCAAACGGGTTACGATACACCAAACCCAGTTCGCAAAGAACCAATTTCACTTTACCCAATTCCAATTTCCGATCCAAAACCCTAATTTCACCCAAATGCAGCGTGTCCGTACGGCCAGCTTCACAGCCTAGATTCATCCAGCACAAGAAAGAGGCGTTTTGGTTCTACAGGTTTCTATCAATTGTGTATGATCATGTCATAAACCCGGGGCATTGGACCGAGGATATGCGGGACGATGCGCTTGAGCCCGCGGAGCTTAACGATAGGAGTTTGGTGGTGGTGGATGTTGGTGGGGGTACAGGGTTTACTACTTTGGGGATTGTGGAACGCGTTGATGCGAAAAATGTCACGATTCTGGATCAGTCGCCGCATCAGCTTGCGAAAGCGAAAGAGAAGGAGGCGTTGAGGGAGTGCAGGATTGTTGAGGGGGACGCGGAGGATCTCCCGTTTGAAACGGATTATGCGGATCGATATGTGTCGGCTGGAAGCATTGAGTACTGGCCCGATCCGCAACGAGGCATCAAAGAAGCATACCGGGTCATAAAGAAAGGCGGGAAGGCTTGTTTAATCGGTCCCGTATATCCGACATTTTGGTTGTCTCGTTTCTTTGCAGACATGTGGATGTTGTTTCCAAAGGAAGAAGAATATATTGAGTGGTTTGAAAAGGCGGGATTTAAAGACGTGCAGATTAAGAGGATTGGCCCACAATGGTACCGTGGGGTCCGCCGCCACGGGCTCATAATGGGATGCTCGGTTACAGGTGTCAAACCCGCGTCTGGTGACTCTCCATTGCATCTTGGTCCTAAAGTTGAGGATGTAGAAAAGCCCGTGAACCCTTTTGTATTTTTTGTGCGGTTCCTTATTGGAGCATCGGCTGGAGTGTACTATGTACTGGTTCCGATCTACATGTGGCTCAAGGACCAGGTGGTGCCTAAAGGTCAACCGATCTGA 996 49.1 MASSIISGANHLSFASNGLRYTKPSSQRTNFTLPNSNFRSKTLISPKCSVSVRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELNDRSLVVVDVGGGTGFTTLGIVERVDAKNVTILDQSPHQLAKAKEKEALRECRIVEGDAEDLPFETDYADRYVSAGSIEYWPDPQRGIKEAYRVIKKGGKACLIGPVYPTFWLSRFFADMWMLFPKEEEYIEWFEKAGFKDVQIKRIGPQWYRGVRRHGLIMGCSVTGVKPASGDSPLHLGPKVEDVEKPVNPFVFFVRFLIGASAGVYYVLVPIYMWLKDQVVPKGQPI 331
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01440 331 PANTHER 2-METHYL-6-PHYTYL-1,4-HYDROQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 1 331 IPR044649 GO:0051741(InterPro)
Bial10g01440 331 Gene3D Vaccinia Virus protein VP39 71 262 IPR029063 -
Bial10g01440 331 ProSiteProfiles MPBQ-MBSQ family SAM-binding methyltransferase profile. 59 268 IPR031164 GO:0032259(InterPro)
Bial10g01440 331 CDD AdoMet-MTases 114 205 - -
Bial10g01440 331 Pfam Methyltransferase domain 109 203 IPR013216 GO:0008757(InterPro)
Bial10g01440 331 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 257 IPR029063 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01440 K12502 MPBQ/MSBQ methyltransferase [EC:2.1.1.295]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
24070 Bial10g01440 Bial16g00924
24071 Bial10g01440 Bial4g01099
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:14581753 Bial16g00924 Bial-Chr16:11558934 wgd
Bial Bial-Chr10:14581753 Bial4g01099 Bial-Chr4:13296029 wgd