AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial10g01444 ATGAAGCGGTGGATCGGTTTTGTTTTTGTCATCTTCTACTTAACTCCTTCTGGGGTCTTTGCAATTGATAATAATTTCAATCAAGCATTTCCAATAATTGAACCCGATCCTGGTCATACAAAGCTTCGTCTTTCTAGTGAAGGACTCGAAGCTATTAAAAGAATAACCAACCCTATCGCAGCCGTTGCTGTGATTGGTCCATATCGATCTGGAAAGTCTTTTACACTTAATCAGCTTCTTTCACTTTCTTGTTATGAAGGTTTTGGTGTTGGTCATATGCGTGACACTAAAACGAAAGGAATATGGGTGTGGGGAACTCCGGTTGAAATGGATATTAACGGGGTGAAAACATCTGTATTTTATCTTGATACTGAGGGATTTGAAAGCATAGGGAAATCAAACGTCTATGATGACAGGATATTTGCTCTTGCTACAGTTTTGAGTTCGGTCCTTATTTACAATTTACCTGAAACCATACGTGAAGCTGATATATCAAGATTGTCATTTGCGGTTGAGCTTGCTGAAGAGTTTTATGGAAGAGTCGAGGGGCAAGATGTGGCGTTTGAACCAGCTAAATTGTTGTGGCTTATACAACGTGACTTTTTACAGGGAAAATCTGTAAAAGAAATGGTAGATGAAGCTCTGCGGCATGTACCTAATTCTAATGGTGACAAAAATATTGACCAGGTCAACCAGATTCGAGACTCACTAGCTATTATGGGTGATAATAGCACGGCTTTCAGCTTACCACAACCGCATCTACAAAGGACAAAACTTTGTGACTTGAAAGACGAGGAGCTTGATCAAAGTTATGTTAAAAAGAGAGAACAGTTAAAAGAAGTGGTTAAATCCGTTATTCGTCCAAAAATCGTACAAGGCAAAACACTTAATGGGAATGAGTTTGTAGCGTTTCTTGAAAAGATTTTGGAAGCTTTAAACAAGGGTGAGATTCCATCTACAGGGTCGCTTGTTGAGGTATTTAACAAGAAAATATTGGAAAGATGTTTAAAGTTATACGAGGATCGTATGACAAAATTGGTTTTACCAGTTTCCGAGGAATCTTTACAATCCATCCATGAATCTTCTAGAACCGAATCTTTGAAATCTTTTGATGAACAACATTTTGGTCGTCATCACGCCAAGAAATCGGTTGAAGCACTCCATCAAGATATTGAAAAGATGTTTAAGAATTTTGTGATGGCAAATCAATATCAGTCTTCAAAATTGTGTGAGTCACTATATACATTGTGTGAGGACAAAATGGACCAGTTACAAGTACTCAAACTACCATCAATGGCTAAATTCAACGCGGGCTTTCTTCAATGCAACCAAAGTTTTGAAAAAGTGTGTGTTGGGCCTTCTAAGACAATATATGAGCAACGAATGGTTAAGATGATGGGAAAGTCAAAGTCTTTGTTTATAAAGGAATATAATCACAAATTATTCAACTGGCTGGTGGTCTTTTCACTTGTGATGGTGATCGTGGGCCGTTTTGTTATTAAATTCATTTTGCTTGAAATGGGGGCGTGGATACTTTTTATATTTTTGGAGACATACACGCGGTTGTTTTGGTCTCCCGAATCTCTTTATTACAACCCCGTTTGGCACGGCATTGTATCAACTTGGGAAACACTTGTTTACAGCCCGATTCTTGATTTAGACAGATGGGCGATACAAATCGGATTTATTGCATCAATATTGTTAATTTACTGGCGATGTTTTGGAAGAAGGAAGCACAGGCCCCATTCTTTGTTACCGTTGCACCACAACAGTTCAAAAGTTCGGGATAGATCAGAATAG 1800 38.33 MKRWIGFVFVIFYLTPSGVFAIDNNFNQAFPIIEPDPGHTKLRLSSEGLEAIKRITNPIAAVAVIGPYRSGKSFTLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPVEMDINGVKTSVFYLDTEGFESIGKSNVYDDRIFALATVLSSVLIYNLPETIREADISRLSFAVELAEEFYGRVEGQDVAFEPAKLLWLIQRDFLQGKSVKEMVDEALRHVPNSNGDKNIDQVNQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDEELDQSYVKKREQLKEVVKSVIRPKIVQGKTLNGNEFVAFLEKILEALNKGEIPSTGSLVEVFNKKILERCLKLYEDRMTKLVLPVSEESLQSIHESSRTESLKSFDEQHFGRHHAKKSVEALHQDIEKMFKNFVMANQYQSSKLCESLYTLCEDKMDQLQVLKLPSMAKFNAGFLQCNQSFEKVCVGPSKTIYEQRMVKMMGKSKSLFIKEYNHKLFNWLVVFSLVMVIVGRFVIKFILLEMGAWILFIFLETYTRLFWSPESLYYNPVWHGIVSTWETLVYSPILDLDRWAIQIGFIASILLIYWRCFGRRKHRPHSLLPLHHNSSKVRDRSE 599
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial10g01444 599 FunFam Guanylate-binding family protein 293 425 - -
Bial10g01444 599 Gene3D - 21 292 IPR027417 -
Bial10g01444 599 Gene3D - 293 431 - -
Bial10g01444 599 Pfam Guanylate-binding protein, C-terminal domain 293 414 IPR003191 GO:0003924(InterPro)|GO:0005525(InterPro)
Bial10g01444 599 Pfam Guanylate-binding protein, N-terminal domain 41 279 IPR015894 GO:0003924(InterPro)|GO:0005525(InterPro)
Bial10g01444 599 ProSiteProfiles GB1-RHD3-type guanine nucleotide-binding (G) domain profile. 56 176 IPR030386 GO:0005525(InterPro)
Bial10g01444 599 SUPERFAMILY Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 292 513 IPR036543 GO:0003924(InterPro)|GO:0005525(InterPro)
Bial10g01444 599 PANTHER GUANYLATE BINDING PROTEIN 29 551 - GO:0003924(PANTHER)|GO:0005525(PANTHER)
Bial10g01444 599 CDD GBP 54 282 - -
Bial10g01444 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 289 IPR027417 -
Bial10g01444 599 FunFam Guanylate-binding family protein 24 292 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial10g01444 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
361601 Bial10g01444 Bial12g02660
361602 Bial10g01444 Bial24g02502
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:14638693 Bial12g02660 Bial-Chr12:56856289 wgd
Bial Bial-Chr10:14638693 Bial24g02502 Bial-Chr24:55866685 wgd