AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial12g02274 ATGGGTTGCAGAAATCAAGAACAACAACAACACAGCAGATCATCATCATCGTCTATTGTAAACGATGCGTTGCTGTTAACCACCATGTGTCTCATTGGTCTCTCCGTTGATGTTCACATCAAAGATGGCTCTGTTTATTCTGGAATCTTCCACACTGCCTGCGTTGAACATCGTTACGCTATTGTGTTGAAACGAGCAAAGATGATGAAGAAAGGTAGTTGTAATTCAAATGTGGCGAATGAGGAGGTGATCCCCACGCTCATAATCCAATCTGAGGATCTTGTTCAAGTAGTTGCAAAGAAAGTAATAATTCCTGCAGATGGTGTTGCTGGACACGGAACTGGAGATGAAACAGGGGCTGTTGCATGCTCCTTTTCTTCTAACGGAACAGAATCAAATAAAACAATGACTAGCAAGTCAAATGTTGGTCAACCATACACTAATCAAACACGACGGTCGTCTGGAACTGAAAACGGGTTTGCTAATGGATTTAGACCCGAGAACAGTATTCACTCAACCACTGCTCTTGAAGCAAAAGATACAGATGCGAAAGATTCAACAAAGAAGGAAGAATGTTTGAAGGATCCGGATAATAGCAGAAAAAATGGTAATCACACTAGTTCATCAACTCCAACTGACACCGTCTCTACAAAAATCTCAAATTCTAATCGAACCACTAAGGAGTTCAAACTCAACCCTGGAGCAAAGATATTTTCTCCATCGTTTCCAAATAAAAGATCACCGACCCCTCAAGCGATGGTGACGGGTGCAAATCTTGTATACAATGCCGACAGTCATCCTAGTGTTCCGGTTGCTGGGCCACAGCCTGAAGTTGAAATCAGCCCGTTTGCTACCCGTTCAGTGCCTGTTAAGTTTGTTCCATATGGAAGCAATGATGTACCACACCCTCCTCCTGTTGTTGGATATATGGCAAACAGGAGTCAACCCGTCAGATACGGGCCATATCATCCGGCGGTCCAAACAGCACCTACCTATGTTCAACCCAACTCTCAAAATGTAATGGTTGGACGATTGGGACCCGTTGTCTATGTCCATCCGGTTTCCCAAGACGTGGTCCCAAGCACGAATAGCTTCTCCTCTGTATTAACTCCACACCAACTCCATGTCCCTAAACACCAAGGAACCCCTACGGCTCAAGCATTGCAGCTACCATATATAGGCGGTGGTGTTGGTGGTCAGGCACCATATATTTTGCCAGGCCACGTTCCAATATCGCAGCTGCCTTATCCTGTGATGCACCCGATCACAATCCCAGGATCAAATGGTTATTTGGTATCAAAATTTTCTTGA 1311 44.47 MGCRNQEQQQHSRSSSSSIVNDALLLTTMCLIGLSVDVHIKDGSVYSGIFHTACVEHRYAIVLKRAKMMKKGSCNSNVANEEVIPTLIIQSEDLVQVVAKKVIIPADGVAGHGTGDETGAVACSFSSNGTESNKTMTSKSNVGQPYTNQTRRSSGTENGFANGFRPENSIHSTTALEAKDTDAKDSTKKEECLKDPDNSRKNGNHTSSSTPTDTVSTKISNSNRTTKEFKLNPGAKIFSPSFPNKRSPTPQAMVTGANLVYNADSHPSVPVAGPQPEVEISPFATRSVPVKFVPYGSNDVPHPPPVVGYMANRSQPVRYGPYHPAVQTAPTYVQPNSQNVMVGRLGPVVYVHPVSQDVVPSTNSFSSVLTPHQLHVPKHQGTPTAQALQLPYIGGGVGGQAPYILPGHVPISQLPYPVMHPITIPGSNGYLVSKFS 436
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial12g02274 436 PANTHER ATAXIN 2-RELATED 134 421 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Bial12g02274 436 MobiDBLite consensus disorder prediction 202 228 - -
Bial12g02274 436 MobiDBLite consensus disorder prediction 129 228 - -
Bial12g02274 436 MobiDBLite consensus disorder prediction 177 201 - -
Bial12g02274 436 MobiDBLite consensus disorder prediction 129 176 - -
Bial12g02274 436 Pfam Ataxin 2 SM domain 21 100 IPR025852 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial12g02274 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184650 Bial12g02274 Bial24g02133
363262 Bial12g02274 Bial24g02133
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
794425 Bial Bial12g02274 Bial-Chr12:53066745 Bial24g02133 Bial-Chr24:51916919