AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial12g02300 ATGCAACCCCAGAAACCCTCACCGGAATCCGACCTCCCCTCCCTCGCCGCCATCAAAGTCAAATCCTCCTCCCCACGCTTCCGCCCCACCGGCACCGAAACCCCCACCGCCGGCGCCCAACGCCGCATCGGCATCGCCGTCGACCTCAGCGACGAGAGCGCCTTCGCCGTCAAATGGGCCGTCCACCAGTACATCCGCCCCGGCGACGCCGTCATCCTCATCCACGTCCGCCCCACCTCCGTCCTCTACGGCGCTGACTGGGGCTCCGTTGACCTATCCATCGTCGACACCGACGACGAAGCCTCCAAACTAAAACTCGAAGACGACTTCGATACTTTCACCACCACCAAATCCGCTGACCTGGCGCAGCCGCTGGTGGACGCGCACATACCGTATAAGATCCATATTGTGAAGGATCATGATATGAAGGAGAGGCTTTGTTTGGAGGTTGAGAGGTTAGGGTTAAGTGCGGTTATTATGGGGAGCCGAGGGTTTGGTGCCACTAAACGTGGGAGTGATGGACGGCTTGGGAGTGTTAGTGATTACTGTGTTAGGCACTGCGTGTGTCCGGTTGTCGTTGTTAGGTATCCCGATGAGAAGGAGGCTGCGGCTGCTGGTTCGGGCTCGGCTCAGCCTGTTGTTCAGGTTGCTAAACCTGATGATGAGGATGAAGAGGAGTCCGAGCATCGTGATGCGGCAGCTGTCGAGGCTAAATGTTAG 720 58.47 MQPQKPSPESDLPSLAAIKVKSSSPRFRPTGTETPTAGAQRRIGIAVDLSDESAFAVKWAVHQYIRPGDAVILIHVRPTSVLYGADWGSVDLSIVDTDDEASKLKLEDDFDTFTTTKSADLAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGATKRGSDGRLGSVSDYCVRHCVCPVVVVRYPDEKEAAAAGSGSAQPVVQVAKPDDEDEEESEHRDAAAVEAKC 239
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial12g02300 239 MobiDBLite consensus disorder prediction 1 37 - -
Bial12g02300 239 MobiDBLite consensus disorder prediction 202 239 - -
Bial12g02300 239 Gene3D HUPs 31 206 IPR014729 -
Bial12g02300 239 PRINTS Universal stress protein signature 40 58 IPR006015 -
Bial12g02300 239 PRINTS Universal stress protein signature 173 195 IPR006015 -
Bial12g02300 239 Pfam Universal stress protein family 41 195 IPR006016 -
Bial12g02300 239 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 41 198 - -
Bial12g02300 239 CDD USP-Like 42 194 - -
Bial12g02300 239 PANTHER OS01G0783500 PROTEIN 6 230 IPR044162 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial12g02300 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184662 Bial12g02300 Bial24g02159
363294 Bial12g02300 Bial16g02634
363295 Bial12g02300 Bial24g02159
363296 Bial12g02300 Bial4g03236
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr12:53328274 Bial18g01685 Bial-Chr18:34079008 dispersed
Bial Bial-Chr12:53328274 Bial16g02634 Bial-Chr16:68235825 wgd
Bial Bial-Chr12:53328274 Bial24g02159 Bial-Chr24:52183598 wgd
Bial Bial-Chr12:53328274 Bial4g03236 Bial-Chr4:74167318 wgd