Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial12g02341 | ATGGCGACTCGCGTTCTCCTACGCACTCTTCGCAATCAAACCCTAATCCGTCGTTCCTTCCGTCCTATCGCCGCCATTGCCACCGCTAATTTCCACCAGTCTTCCGTCGCAGCCGCCGATGTCCGTGCGTTCTCAACTCGTCCGACAACATCTTCTCTGAACGATTCGAACCCTAATTGGTCCAATCGTCCCCCAAAGGAAACCATTCTTCTCGACGGCTGTGATTTTGAGCACTGGCTTGTTGTTGTCGACAAACCTGAAGGCGAGCCTACAAGAGATGAGATTATTGATTCGTATATTAATACCCTGGCTAAGGTCATTGGCAGTTATGATGAAGCAAGGATGAAAATCTACTCGGTTTCGACCAGATGCTATTTTGCATTTGGAGCTCTTGTGTCTGAAGAACTTTCTTACAAGCTTAAGGAATTACCTGGAGTTCGTTGGGTGCTTCCTGATTCTTACTTGGATGTTAAGAACAAGGATTATGGAGGTGAACCGTTTATTGATGGGAAGGCTGTTCCATATGATCCAAAGTACCATGAAGAATGGATCAGAAATAATGCCCGTGCTAACGAGAGAAACAGGAGGAATGATAGGCCTCGCAACGACAGATCTAGGAACTTTGAGCGAAGACGAGAGAACATGCAAAGCAACCGGGGTCCGCCCAATAACATGGACGGTCCACCTTCTAATATGAGGCCACAAGGTCCGCCACCGCCATCTTACAATGCTGGGCCGCAAGGGCCACCTCCACCACCCTATAACGGAGCTCCACAAGGTCCACCACCACCAACCTATAGCGGAGCACCACAAGGTCCACCACCACCAACCTATAACGGAGCGCCACAAGGTCCACCAACGCCACCCTATAACAAAGCGTCACAAGGTCCACCACCACCAACCTATAACAAAGCGCCACAAGGTCCATCACCACCAACCTATAACGGGGCGCCACAAGGTCCACCACTACCCTACAACGGAGCGCCACAAGGTCCACCACCATCCTACAACGGAGGTCCTCGAGGTCCACCACCACCTTACAATGGAGGGCCACAAGGACCATCTCCACCACCCTACAATGGTGGGCCACCAAACATGGGATATCAAAACAATGGATGGACGCCTAATAATGGTCCCAACTATCAGCAGCAGCAGCAGCAGTATGGGCCCAACAGTGGAAGAATGGGCTACCAGCAATCTGGGCCTGTGCCCAACAATTATCCTCCGAATTCTAACCCTTACCAGTCCCAGGATGTTCCTGGAAGAGACATGCCCTCTGCGGCCAACTACGAATGA | 1296 | 51.16 | MATRVLLRTLRNQTLIRRSFRPIAAIATANFHQSSVAAADVRAFSTRPTTSSLNDSNPNWSNRPPKETILLDGCDFEHWLVVVDKPEGEPTRDEIIDSYINTLAKVIGSYDEARMKIYSVSTRCYFAFGALVSEELSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNDRSRNFERRRENMQSNRGPPNNMDGPPSNMRPQGPPPPSYNAGPQGPPPPPYNGAPQGPPPPTYSGAPQGPPPPTYNGAPQGPPTPPYNKASQGPPPPTYNKAPQGPSPPTYNGAPQGPPLPYNGAPQGPPPSYNGGPRGPPPPYNGGPQGPSPPPYNGGPPNMGYQNNGWTPNNGPNYQQQQQQYGPNSGRMGYQQSGPVPNNYPPNSNPYQSQDVPGRDMPSAANYE | 431 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial12g02341 | 431 | MobiDBLite | consensus disorder prediction | 227 | 363 | - | - | |
| Bial12g02341 | 431 | MobiDBLite | consensus disorder prediction | 364 | 419 | - | - | |
| Bial12g02341 | 431 | PANTHER | MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED | 21 | 216 | IPR039206 | GO:0005739(PANTHER)|GO:0016554(InterPro)|GO:0080156(PANTHER) | |
| Bial12g02341 | 431 | MobiDBLite | consensus disorder prediction | 191 | 216 | - | - | |
| Bial12g02341 | 431 | PRINTS | Proline rich extensin signature | 240 | 261 | - | - | |
| Bial12g02341 | 431 | PRINTS | Proline rich extensin signature | 269 | 285 | - | - | |
| Bial12g02341 | 431 | PRINTS | Proline rich extensin signature | 296 | 313 | - | - | |
| Bial12g02341 | 431 | PRINTS | Proline rich extensin signature | 322 | 347 | - | - | |
| Bial12g02341 | 431 | PRINTS | Proline rich extensin signature | 227 | 239 | - | - | |
| Bial12g02341 | 431 | MobiDBLite | consensus disorder prediction | 191 | 431 | - | - | |
| Bial12g02341 | 431 | Pfam | Multiple organellar RNA editing factor 1, MORF domain | 76 | 167 | IPR054059 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial12g02341 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 25199 | Bial12g02341 | Bial3g03208 | |
| 184684 | Bial12g02341 | Bial24g02201 | |
| 363333 | Bial12g02341 | Bial16g02686 | |
| 363334 | Bial12g02341 | Bial24g02201 | |
| 363335 | Bial12g02341 | Bial4g03317 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr12:49657550 | Bial12g02341 | Bial-Chr12:53707571 | dispersed | |
| Bial | Bial-Chr12:53707571 | Bial13g02067 | Bial-Chr13:27501033 | dispersed | |
| Bial | Bial-Chr12:53707571 | Bial16g02686 | Bial-Chr16:69497746 | wgd | |
| Bial | Bial-Chr12:53707571 | Bial24g02201 | Bial-Chr24:52579467 | wgd | |
| Bial | Bial-Chr12:53707571 | Bial3g03208 | Bial-Chr3:76641543 | wgd | |
| Bial | Bial-Chr12:53707571 | Bial4g03317 | Bial-Chr4:75825562 | wgd |