Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial12g02344 | ATGGCGGACGAGAAAGAGGTGAAGGAAGTAGTTGAAGAGAAGAAGAATGATAAGAATAATAATAATGATAAGAAGAAGAAGAAAGGTGTGCTGTCTCGGATTTGGAATGCGGTGTTTGGATTACGTGGTGATGATTTTGAGAAGAGGCTGCAATACATATCGAAAGAAGAAGCTACTCTTCATAACAGGATTAAAAGGAGATCTATGAGATGGAGAAGAACTGCCAGGAATCTGATTATCTTTTCGGTTATACTTGAGTTGGTTGCAATCGGTTATGCTATAATGACCACAAGAACAATAGACATGGATTGGAGAATAAGATCATTGCATGTGCTACCTATGTTTCTTTTGCCTGCGTTATCGTTTGGTTTGCATTATGGGCTTTCAAGATTCACCAAATATTGTGATCGAAGGGATCACAAAGCATTAGAGAAGCTTCAAGAAGAAAGACAAGCAAAAATTGATGAACTTAAAGAGAGAAATAATTATTACATCACTCAGCAACTCATTCAGAAATATGACCCGGATCCAGCAGCAAAAGCGGCTGCTGCATCGGTTCTTGCATCAAAACTTGGTGCAGATTCGGGCCTGAAAGTGTTTCTTGAACACGAATTACAACCGAACACATATGACACGGGAAAAAGCAGTGATTTTGAGCTTCAACAATCTACTGGTCTCAGAAAACGAAATCAATCAAACCCTAAATCTCCTGGAAGCAATTCTGGTCAACAATCTGATAAACAAACGCCTCAATTTGGAGGAAACGAGGTTTCTGAGAGTTTAACATATGATAATCTTGTTGTTGAGCATCATGATCCTGCAGATGCAGGTTCTCAAGATGGCAGTTGGCTTGCTAAAATTGCTGCATTGCTTGTGGGAGAGGATCCTACTGATTCTTATGCACTTATATGTGGAAATTGCCATATGCATAATGGTCTTGCAAGAAAAGAGGATTTCCCATTTATTACTTACTACTGTCCGCATTGTCGCGCGTTAAACAAACCAAAGAATTCGGGTTCTTCGGATACAATAGCAAGTGCGGATGTTAAGTTGATTGAAGATAGTAACGAGTCAACGGGTGAGAAAGTATCTGCTGTTAGCAGTGGCGTGGTAGCTACGGTGGAGGAGAAGGAAGCAATTGAGGAAACGGTTGTTGCGTAG | 1161 | 40.31 | MADEKEVKEVVEEKKNDKNNNNDKKKKKGVLSRIWNAVFGLRGDDFEKRLQYISKEEATLHNRIKRRSMRWRRTARNLIIFSVILELVAIGYAIMTTRTIDMDWRIRSLHVLPMFLLPALSFGLHYGLSRFTKYCDRRDHKALEKLQEERQAKIDELKERNNYYITQQLIQKYDPDPAAKAAAASVLASKLGADSGLKVFLEHELQPNTYDTGKSSDFELQQSTGLRKRNQSNPKSPGSNSGQQSDKQTPQFGGNEVSESLTYDNLVVEHHDPADAGSQDGSWLAKIAALLVGEDPTDSYALICGNCHMHNGLARKEDFPFITYYCPHCRALNKPKNSGSSDTIASADVKLIEDSNESTGEKVSAVSSGVVATVEEKEAIEETVVA | 386 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial12g02344 | 386 | Coils | Coil | 1 | 28 | - | - | |
| Bial12g02344 | 386 | MobiDBLite | consensus disorder prediction | 224 | 256 | - | - | |
| Bial12g02344 | 386 | PANTHER | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK | 23 | 365 | IPR040115 | GO:0071782(PANTHER)|GO:0071786(PANTHER)|GO:0071786(InterPro) | |
| Bial12g02344 | 386 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Bial12g02344 | 386 | Coils | Coil | 140 | 163 | - | - | |
| Bial12g02344 | 386 | Pfam | Predicted integral membrane zinc-ribbon metal-binding protein | 283 | 333 | IPR019273 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial12g02344 | K23292 | endoplasmic reticulum junction formation protein lunapark |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 25200 | Bial12g02344 | Bial3g01746 | |
| 25201 | Bial12g02344 | Bial3g03205 | |
| 184685 | Bial12g02344 | Bial24g02204 | |
| 363336 | Bial12g02344 | Bial16g02715 | |
| 363337 | Bial12g02344 | Bial24g02204 | |
| 363338 | Bial12g02344 | Bial4g03335 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr12:53724517 | Bial4g03335 | Bial-Chr4:76089711 | dispersed | |
| Bial | Bial-Chr12:53724517 | Bial16g02715 | Bial-Chr16:69966127 | wgd | |
| Bial | Bial-Chr12:53724517 | Bial24g02204 | Bial-Chr24:52596417 | wgd | |
| Bial | Bial-Chr12:53724517 | Bial3g01746 | Bial-Chr3:60382793 | wgd | |
| Bial | Bial-Chr12:53724517 | Bial3g03205 | Bial-Chr3:76619953 | wgd | |
| Bial | Bial-Chr12:53724517 | Bial4g03334 | Bial-Chr4:76086036 | wgd |