Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial12g02710 | ATGGATTCGGTTAAGCTCTGGCCCCCGGGCCACAGCACGAGGCAAATACTCGTGGATCGTATTCTAAGAAACCTCACAACACCATCCATATTAACAAGAAAATACGGGCTTTTAAGCAAAGAAGAAGCAGAAGAAGATGCTAAACAAATCGAATCCGCTGCGTTTGCAGCCGCATCCCAACAATTTGAAAAATACCCTGATACTGATGGCGGGTCCGCGATCCAAGTCTATGCTAAAGAATCTAGCAAACTCATGGTTGAAGTCATCAAAGCCGGGCCCAAACATAAAGAAGACCGAGACACAGTAACAGAGTTGACCACATTTGACAACGAACACGTGTTCGACATCTCTGGAGGCCGTCGGGCCTTCATAGATGCCGAAGAAGCTAAAGAGTTGCTAAAACCGTTAAAAGAGCCCGGAAACAAATTTACTAAAATCCGTTTTAGTAACAGAAGTTTTGGGCTCCCTGCAGCCCATGTGGCTGCATCGGTTTTGTCAATGGTCAAAGACCAGTTGACCGAGGTTGACTTGTCTGATATTGTTTCGAGGCGGCCCGAGCCAGAGGCGGTTCAGGTTATGAAGATGTTTTCAACAGCACTTGAGGGTAGTAATTTGAGTTATTTAAATTTGTCTAATAATGCTTTGGGTGAAAAGGGGGTTAGGGCATTAGGGGGGCTTTTGAAGTCTCAAGGGAGTCTTGTTGAGTTGTATTTTATGAACGCGGGTATATCGCAAGAGGCTGCGAAGGCGGTATGCGAGTTGATTCCTTCGACTAGTAAACTTAAGATTCTTCATTTTCATCATAACATGACGGGAGATGAAGGCGCGGTTGCTATTGCGCAACTCGTTAAAGGGTCTCCAAATCTAGAGGATTTCAGGTGTTCTTCATCAAGGATTGGGTCAGTAGGGGGTGTTGCACTAGCCGAAGCACTTAATACATGTACCCTTTTGAAAAAACTCGACTTACGTGACAACATGTTCGGACCAAAACCAGGCGTCGCGTTAAGTCAAACACGCCACACAAACCTTACTGAAATCTACCTAAGTTACTTAAATTTAGAAAACGAAGGAACCATAGCCCTTGCAAAAGCCCTAAAACAACTCGATTCTACCCTTGAAGTAATTGAAATGGCGGGAAACAACATCACTTCAGAAGCCGCAGCAAAAGCTTTAGCCGAATGTTTAATCTCAAACAAACATTCTCTAACGCGGATAAACTTATCTGAAAATGAATTAAAAGACGCAGGTGCGATGATGATTGCTAATGCACTTGGTGACGGGTTTGGGGAGTTGTGTGTGGTTGATTTGAGCGCCAATGGGGTTGAGACAGGTGGCGCCGTGGCATTGGCTAAAGCGGTTGTGGGGAAACCGGGGTTTAGGTTGTTAAATATAAATGGTAACTTTTTGTCTTATGATGGTGTTGAGGTTGTTAAAGGGATCTTTAAGGATTTTCCTCGTATGCTTGGACCACTTGATCAGAACGATCCTCGTGGTCATGAGCTTGATGAACTTCAGTCGAAGCTTAAGGATCTTGAAATGAAGCGAAAAGATTAA | 1554 | 44.21 | MDSVKLWPPGHSTRQILVDRILRNLTTPSILTRKYGLLSKEEAEEDAKQIESAAFAAASQQFEKYPDTDGGSAIQVYAKESSKLMVEVIKAGPKHKEDRDTVTELTTFDNEHVFDISGGRRAFIDAEEAKELLKPLKEPGNKFTKIRFSNRSFGLPAAHVAASVLSMVKDQLTEVDLSDIVSRRPEPEAVQVMKMFSTALEGSNLSYLNLSNNALGEKGVRALGGLLKSQGSLVELYFMNAGISQEAAKAVCELIPSTSKLKILHFHHNMTGDEGAVAIAQLVKGSPNLEDFRCSSSRIGSVGGVALAEALNTCTLLKKLDLRDNMFGPKPGVALSQTRHTNLTEIYLSYLNLENEGTIALAKALKQLDSTLEVIEMAGNNITSEAAAKALAECLISNKHSLTRINLSENELKDAGAMMIANALGDGFGELCVVDLSANGVETGGAVALAKAVVGKPGFRLLNINGNFLSYDGVEVVKGIFKDFPRMLGPLDQNDPRGHELDELQSKLKDLEMKRKD | 517 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial12g02710 | 517 | Gene3D | Ribonuclease Inhibitor | 388 | 488 | IPR032675 | - | |
| Bial12g02710 | 517 | Pfam | WPP domain | 3 | 98 | IPR025265 | - | |
| Bial12g02710 | 517 | SMART | LRR-RI-2 | 258 | 285 | - | - | |
| Bial12g02710 | 517 | SMART | LRR-RI-2 | 399 | 426 | - | - | |
| Bial12g02710 | 517 | SMART | LRR-RI-2 | 230 | 257 | - | - | |
| Bial12g02710 | 517 | SMART | LRR-RI-2 | 340 | 367 | - | - | |
| Bial12g02710 | 517 | SMART | LRR-RI-2 | 456 | 483 | - | - | |
| Bial12g02710 | 517 | SMART | LRR-RI-2 | 286 | 313 | - | - | |
| Bial12g02710 | 517 | SMART | LRR-RI-2 | 202 | 229 | - | - | |
| Bial12g02710 | 517 | SMART | LRR-RI-2 | 369 | 397 | - | - | |
| Bial12g02710 | 517 | Gene3D | WPP domain | 3 | 101 | IPR038214 | - | |
| Bial12g02710 | 517 | Gene3D | Ribonuclease Inhibitor | 120 | 387 | IPR032675 | - | |
| Bial12g02710 | 517 | PANTHER | RAN GTPASE-ACTIVATING PROTEIN 1 | 3 | 514 | IPR045203 | GO:0005096(InterPro) | |
| Bial12g02710 | 517 | Pfam | Leucine Rich repeat | 204 | 223 | IPR001611 | GO:0005515(InterPro) | |
| Bial12g02710 | 517 | Pfam | Leucine Rich repeat | 399 | 421 | IPR001611 | GO:0005515(InterPro) | |
| Bial12g02710 | 517 | SUPERFAMILY | RNI-like | 105 | 497 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial12g02710 | K14319 | Ran GTPase-activating protein 1 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 184878 | Bial12g02710 | Bial24g02553 | |
| 361585 | Bial10g01391 | Bial12g02710 | |
| 363591 | Bial12g02710 | Bial22g00982 | |
| 363592 | Bial12g02710 | Bial24g02553 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr10:13955479 | Bial12g02710 | Bial-Chr12:57299723 | dispersed | |
| Bial | Bial-Chr12:57299723 | Bial4g01040 | Bial-Chr4:12804721 | dispersed | |
| Bial | Bial-Chr12:57299723 | Bial24g02553 | Bial-Chr24:56363121 | wgd |