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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial12g02711 ATGGTCAAACGCTCTGCATCAGCATTGAGTACCAAGAGCTTAGAAATGTGTACGGAGAGTTTAGGTAGTGAGACTGGGAGTGAAGTGAGTGAAAGTGGTGATGAATTTTGTGCAATTTCACAATTGGAAAGAGAAAAAATGAGGGAAAGTCAACGGTCAGCGTGCCGGAATCTTGACCGGAGAATTCGCCGGGTAGACTTCCCGCCGCCGTTGACCTCCATCAGCGACTCTGAAGGGGCGGTGAAGGTGAGGCACCACCGCGAGGGTGGGAGGTTGGTTATAAAGGCTGAGAGTGTTTTAAATTGTGGTACAAATTTTCAAGCGGAGCGTACAAATGGAAGGCTAAAGCTTTCTTTGTTGAGGGAGTGTTGTGTAAATTCTGAAAGTGAAGGGGGTGAAGTGAAGGATTATGAAAGTGAAGGGGGTGAAGTGGAAGATTATGAAAGTGAATGTGATGATGTGGAATCTAACGAGGACGAGGATGAGGAGGAGAAGGAAAACGGTGGTTGGCCGAGGGACATGGACGGAAACCGGTGGTTGATGGGTGGAGATGGTAGTTTGAGTAGGTTTACAAGGTGCCATGAGGGTGGAAACGGCAACAAAGTGTTCGCAAATTGGGGTTCTTCTTGGATGGCAATTTCTTGA 645 47.6 MVKRSASALSTKSLEMCTESLGSETGSEVSESGDEFCAISQLEREKMRESQRSACRNLDRRIRRVDFPPPLTSISDSEGAVKVRHHREGGRLVIKAESVLNCGTNFQAERTNGRLKLSLLRECCVNSESEGGEVKDYESEGGEVEDYESECDDVESNEDEDEEEKENGGWPRDMDGNRWLMGGDGSLSRFTRCHEGGNGNKVFANWGSSWMAIS 214
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial12g02711 214 MobiDBLite consensus disorder prediction 139 166 - -
Bial12g02711 214 Coils Coil 137 164 - -
Bial12g02711 214 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 1 206 IPR021410 -
Bial12g02711 214 MobiDBLite consensus disorder prediction 131 178 - -
Bial12g02711 214 Pfam Fantastic Four meristem regulator 66 119 IPR046431 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial12g02711 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184879 Bial12g02711 Bial24g02554
361583 Bial10g01390 Bial12g02711
363593 Bial12g02711 Bial22g00981
363594 Bial12g02711 Bial24g02554
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13922252 Bial12g02711 Bial-Chr12:57311811 dispersed
Bial Bial-Chr12:57311811 Bial22g00981 Bial-Chr22:9582395 dispersed
Bial Bial-Chr12:57311811 Bial24g02554 Bial-Chr24:56388324 wgd