AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial12g02715 ATGACGTCAGCTCAGCTTCATCACACTTCACTCACCGGAAACAACCGTCATCCTAATCTCACCACTCGTATTATTAATCTCCGATCACAAACCCTAACCACCGTAACACCTCTCAATTTTACCATTTTACCCCTCCGATCAAAGCCAATTCACCGTTATTCACCATCCTGTGCCGCCATCTCCGGCGGCGGCGACGGCGCCGGCGGATCCCGCCATGGATCCGGCGGCGGAGGCGGTAACGGTAACGGCGGCGATAGTAACAGCAACAGCAATAGTAACGGAAATGGTGACAGTTTTGGTTTATTTAGTGCTTTTATTAACGGTTGGAGATCTAGGGTTTCAGCAGATCCCCAATTTCCATTCAAAGTATTAATGGAAGAAGTTGTTGGTGTAAGCGCAACCGTTTTCGGTGACATGGCATCTCGTCCGAATTTCGGTTTAAACGAGCTCGATTTCGTCTTCTCCACGTTAGTTGTAGGATCAATATTGAACTTCACTCTAATGTACTTATTAGCACCCACCATGACATCAACATCCACATCTCTTCCTTTCGTATTTGCCAACTCGCCACCGGGCCACATGTTTGAGCCCGGTGCGTACACGCTGGTTAACCGGCTAGGGACGTTCGTGTACAAAGGGGCTGTTTTTGCAGCCGTGGGGTTTGCGGCTGGGTTAGTTGGGACTGCAGTGTCGAATGGGTTGATTATGGTAAGGAAGAAGATGGACCCGGGGTTTGAGTCGCCGAATAAGCCCCCGCCCACGGTTTTGAATGCGGTTACTTGGGCGATTCATATGGGGTTAAGTGCTAATTTGAGGTACCAAAGTTTGAATGGGATTGAGTATTTGTTGGCGAAGGGGCTGCCGCCGTTTTTGTTTAAGAGCTCGGTGTTTGGGTTGAGGTTGGCGAATAATGTTGTTGGTGGGATGACTTTTGTGATGTTGGCGAGGGTGACGGGTTCACAAAGTGCGGCTAGTGGTGAAACGAAGGTTGTTGATAAAGAGGTTTCGGATGAGGAGAAGAAGTTAATTGATAACGAAGTTCCTTCCAAGTGA 1053 48.72 MTSAQLHHTSLTGNNRHPNLTTRIINLRSQTLTTVTPLNFTILPLRSKPIHRYSPSCAAISGGGDGAGGSRHGSGGGGGNGNGGDSNSNSNSNGNGDSFGLFSAFINGWRSRVSADPQFPFKVLMEEVVGVSATVFGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMTSTSTSLPFVFANSPPGHMFEPGAYTLVNRLGTFVYKGAVFAAVGFAAGLVGTAVSNGLIMVRKKMDPGFESPNKPPPTVLNAVTWAIHMGLSANLRYQSLNGIEYLLAKGLPPFLFKSSVFGLRLANNVVGGMTFVMLARVTGSQSAASGETKVVDKEVSDEEKKLIDNEVPSK 350
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial12g02715 350 MobiDBLite consensus disorder prediction 322 350 - -
Bial12g02715 350 MobiDBLite consensus disorder prediction 330 350 - -
Bial12g02715 350 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 44 324 - -
Bial12g02715 350 Pfam Protein RETICULATA-related 112 279 IPR021825 -
Bial12g02715 350 MobiDBLite consensus disorder prediction 62 92 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial12g02715 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184882 Bial12g02715 Bial24g02558
361530 Bial10g01267 Bial12g02715
363599 Bial12g02715 Bial22g00858
363600 Bial12g02715 Bial24g02558
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
677936 Bial Bial12g02715 Bial-Chr12:57349410 Bial21g01404 Bial-Chr21:23248799
777558 Bial Bial10g01267 Bial-Chr10:12671930 Bial12g02715 Bial-Chr12:57349410
793151 Bial Bial12g02715 Bial-Chr12:57349410 Bial22g00858 Bial-Chr22:8244263
794737 Bial Bial12g02715 Bial-Chr12:57349410 Bial24g02558 Bial-Chr24:56452316