AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial12g02718 | ATGGACATCGAGAAGAAAGAAGAACAACCACTCCGATCAACCCCCACCACCACCACCACCGTCTCCGGCCACCACACCAAACCAATTCGCCGGCGCCGCTGCATAATAATCTGCTCATCAATACTCGCAGTCATCCTCACCATTACCATAACAATAATAATCCTAGCCTTCACCGTCTTCAAAGCCAAAAAGCCAGTCATCTCCGTCACCTCCGTCGCACTACAGGACTTCGACGTCTCCGTCGTTCCGATTCCACCAAGCGTAACACTAAACGTCTCACTCGCACTCGGCATCTCAATCCAAAACCCTAACAAAGTATCCATCAAGTACCGTAACAGCTCGGCTACTCTCCGGTACAAAGGCCGTGACATCGGTGACGTGCCCATACCCGCCGGAAGACTTGGATCCGATGACACCGAGCGGTTGAACCTGACGGTTACTATATTTGCGGATCGGGTCGTGATGGACCCGCAGATCTATTCGGATATTATTGGAGGTGTGTTGCCGATTTCGACTTATACGAAAATTAAAGCGAAAGTTCGGGTGGTGGTGTTTAATATTCATGTCACGTCTACGTCTAGTTGTGATATTAATATTGATGTGAGAACTAGAAGCATTGCTAATGAGACTTGTCGCTACAAGAACAAGTTATAG | 654 | 48.32 | MDIEKKEEQPLRSTPTTTTTVSGHHTKPIRRRRCIIICSSILAVILTITITIIILAFTVFKAKKPVISVTSVALQDFDVSVVPIPPSVTLNVSLALGISIQNPNKVSIKYRNSSATLRYKGRDIGDVPIPAGRLGSDDTERLNLTVTIFADRVVMDPQIYSDIIGGVLPISTYTKIKAKVRVVVFNIHVTSTSSCDINIDVRTRSIANETCRYKNKL | 217 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial12g02718 | 217 | PANTHER | LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY | 14 | 207 | - | - | |
| Bial12g02718 | 217 | SMART | why | 77 | 197 | IPR013990 | GO:0009269(InterPro) | |
| Bial12g02718 | 217 | Pfam | Late embryogenesis abundant protein | 98 | 194 | IPR004864 | - | |
| Bial12g02718 | 217 | Gene3D | - | 49 | 200 | - | - | |
| Bial12g02718 | 217 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Bial12g02718 | 217 | SUPERFAMILY | LEA14-like | 53 | 154 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial12g02718 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 25253 | Bial12g02718 | Bial17g00048 | |
| 25254 | Bial12g02718 | Bial5g01136 | |
| 184885 | Bial12g02718 | Bial24g02561 | |
| 361534 | Bial10g01272 | Bial12g02718 | |
| 363604 | Bial12g02718 | Bial22g00864 | |
| 363605 | Bial12g02718 | Bial24g02561 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr12:57369239 | Bial15g02639 | Bial-Chr15:73657064 | dispersed | |
| Bial | Bial-Chr10:12713346 | Bial12g02718 | Bial-Chr12:57369239 | wgd | |
| Bial | Bial-Chr12:57369239 | Bial17g00048 | Bial-Chr17:2139540 | wgd | |
| Bial | Bial-Chr12:57369239 | Bial22g00864 | Bial-Chr22:8276713 | wgd | |
| Bial | Bial-Chr12:57369239 | Bial24g02561 | Bial-Chr24:56473433 | wgd | |
| Bial | Bial-Chr12:57369239 | Bial5g01136 | Bial-Chr5:16278882 | wgd |