AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial12g02720 ATGGCATCCTCCGGAACGAATTGGAAACTGGCCGATCACCCGAAACTACCGAAAGGAAAGACGATCGCCGTCGTGGTGTTGGACGGTTGGGGTGAAGCCTCACCGAACCAATACAATTGCATCCATGTCGCTGAGACGCCTACCATGGATGCTCTCAAAAATACTGCCCCTGATCGATGGAGATTGGTGAAGGCTCATGGTAAGGCCGTGGGGCTTCCCACAGATGATGACATGGGGAATAGTGAAGTCGGGCACAATGCTCTTGGTGCCGGACGAATCTTTGCTCAAGGTGCAAAACTTGTTGATAATGCTCTTGCATCTGGTAAAATATATGAAGATGAAGGTTTTAATTACATTAAGGAATCTTTTGCAAATAACACTTTGCACCTTATTGGATTGATGAGTGACGGGGGCGTGCACTCGCGCCTTGATCAGTTACAGTTATTGCTCAAAGGTGCTAGTGAACGCGGTGCCAAGAGGATACGTGTTCATGTACTTACTGATGGGCGTGATGTGGTGGATGGGTCAAGTGTTGATTTTGCAGAAACACTTGAAAAGGATCTTGCAGATCTTCGTAGTAAAGGCGTTGATGCACAAATTGCTTCTGGTGGGGGGCGCATGTATGTCACCCTGGACCGTTATGAGAACGACTGGGAAGTTGTGAAGCGCGGTTGGGACGCTCAGGTTCTCGGTGAAGCCCCACACAAATTTAAAAATGCAGTTGAGGCTATCAAGAAGCTAAGGGAAGCTCCCAATGCAAATGACCAATACTTACCACCATTTGTGATTGTTGATGATAGTGGGAAGGCCGTTGGCCCCATAAACGATGGTGATGCGGTTGTCACGTTTAACTTCCGAGCTGATCGTATGACAATGCTTGCACAAGCTCTGGAGTATGAAAAGTTTGATAAGTTTGACCGAGTTAGGTTCCCAAAAATCCGCTATGCGGGAATGCTTCAATATGATGGCGAGTTGAAGCTTCCAAAGTATTATCTTGTTTCGCCTCCATTGATCGAGAGGACTTCGGGTGAATACTTGGTTTATAACGGGATCCGCACCTATGCTTGCAGTGAAACGGTCAAATTCGGGCATGTTACATTTTTCTGGAACGGGAACCGCTCTGGGTATTTTAATGCAGAGTTAGAGAAATATGTGGAAATTCCAAGTGATAGTGGAATTACATTCAATGTGCAACCAAAAATGAAGGCTTTGGAGATTGGTGAGAAGGCCAAAGAAGCCATTCTCAGTGGCAAATTTGACCAGATAAGAGTGAACATACCAAATGGTGACATGGTTGGGCATACCGGTGACATTGATGCTACCATTGTAGCCTGCAAGGCTGCTGATGATGCTGTTAAGATGATTCTTGATGCAGTAGAACAAGTGGGAGGAATATATTTGGTAACCGCAGATCACGGTAATGCAGAAGACATGGTGAAAAGAGACAAGAAGGGAGAGCCTATTGTTGCCAAGGATGGCAAAGTTCAAATCCAAACTTCTCACACTCTTCAACCGGTGCCGGTTGCAATTGGAGGCCCGGGGTTAGCAAAAGGTGTGAAGTATCGGAAGGATGTACCGGATGGTGGATTAGCAAATGTAGCTGCAACTGTGATGAATCTACACGGGTTTCTGGCTCCCGATGACTATGAGACGACACTTATTGAAGTTGATTAA 1674 46.12 MASSGTNWKLADHPKLPKGKTIAVVVLDGWGEASPNQYNCIHVAETPTMDALKNTAPDRWRLVKAHGKAVGLPTDDDMGNSEVGHNALGAGRIFAQGAKLVDNALASGKIYEDEGFNYIKESFANNTLHLIGLMSDGGVHSRLDQLQLLLKGASERGAKRIRVHVLTDGRDVVDGSSVDFAETLEKDLADLRSKGVDAQIASGGGRMYVTLDRYENDWEVVKRGWDAQVLGEAPHKFKNAVEAIKKLREAPNANDQYLPPFVIVDDSGKAVGPINDGDAVVTFNFRADRMTMLAQALEYEKFDKFDRVRFPKIRYAGMLQYDGELKLPKYYLVSPPLIERTSGEYLVYNGIRTYACSETVKFGHVTFFWNGNRSGYFNAELEKYVEIPSDSGITFNVQPKMKALEIGEKAKEAILSGKFDQIRVNIPNGDMVGHTGDIDATIVACKAADDAVKMILDAVEQVGGIYLVTADHGNAEDMVKRDKKGEPIVAKDGKVQIQTSHTLQPVPVAIGGPGLAKGVKYRKDVPDGGLANVAATVMNLHGFLAPDDYETTLIEVD 557
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial12g02720 557 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 8 555 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)|GO:0030145(PANTHER)|GO:0044262(PANTHER)|GO:0046537(PANTHER)
Bial12g02720 557 FunFam 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 96 339 - -
Bial12g02720 557 Gene3D - 96 340 IPR036646 GO:0004619(InterPro)|GO:0005737(InterPro)
Bial12g02720 557 SUPERFAMILY 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain 96 331 IPR036646 GO:0004619(InterPro)|GO:0005737(InterPro)
Bial12g02720 557 CDD iPGM 20 554 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)
Bial12g02720 557 NCBIfam 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 21 549 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)
Bial12g02720 557 PIRSF IPGAM 15 557 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)
Bial12g02720 557 Gene3D Alkaline Phosphatase, subunit A 23 546 IPR017850 -
Bial12g02720 557 Pfam BPG-independent PGAM N-terminus (iPGM-N) 101 322 IPR011258 GO:0004619(InterPro)|GO:0005737(InterPro)|GO:0006007(InterPro)|GO:0030145(InterPro)
Bial12g02720 557 SUPERFAMILY Alkaline phosphatase-like 21 547 IPR017850 -
Bial12g02720 557 Pfam Metalloenzyme superfamily 20 543 IPR006124 GO:0003824(InterPro)|GO:0046872(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial12g02720 K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
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Event-related genes

Select Gene_1 Gene_2 Event_name
25255 Bial12g02720 Bial17g00049
25256 Bial12g02720 Bial5g01135
184886 Bial12g02720 Bial24g02563
363606 Bial12g02720 Bial24g02563
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
677940 Bial Bial12g02720 Bial-Chr12:57375248 Bial5g01135 Bial-Chr5:16273119
792034 Bial Bial12g02720 Bial-Chr12:57375248 Bial17g00049 Bial-Chr17:2142033
792666 Bial Bial12g02720 Bial-Chr12:57375248 Bial19g02488 Bial-Chr19:60512110
794742 Bial Bial12g02720 Bial-Chr12:57375248 Bial24g02563 Bial-Chr24:56480226
797901 Bial Bial12g02720 Bial-Chr12:57375248 Bial7g02493 Bial-Chr7:59345806