AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial12g02766 ATGGCGACTCCTGATGTTGTTGTGCAGGCCGAACACGATCGTTTCTTTGATCACACCAAAGGCGATGCTAAATCACGAGGATTGGCGCTCGAGAAGAAAATCGAATACCTCGAGAGCTTGAACGACAGAGTTAGCAACAGACGGGCACGTAGATGGATAAATGATCGTATATTGCTGGAACTTGTACCTCGTTTGACTGGAGATGAAATCAGAGGGTTGTTTGCTCCACCACCTTTTGGTGATGAGGCCCAACCGTCAGCATTTAGCATGACAAATGTGGGAGAGTGGGACAAATTCAGGAATATAGACATGGATAAAGAGGCTGGTGCACTAGAGGCATTAAAAGGTTTATCATCAAAGAAGAAAAGCAATGTGAATGCTGATAAGATTGCTGCGTTGACCGCATGGCATAGGGTTGACTGCAGAACTCGAGAGGCGTTTCGCCGGAGTTTTCTTCCAGAACTCGTTAATGGTTTTGAGGTGAACATACGTGCCTTTGTATCAGAGGCAGCTAATGAGGAGGTTCTTGTGATGTATGCACAAGATCCGTTTCATAGGCTGTTACTTCATGGTGTTTGTGAGTTTTACAATTTGGTGTCAACAACTGAGACCGAGACCAAAGGTACAAAGGTGTTGAAGATGACCAAAATCAAGAAGAAGAAAGCTGGTAAAAACGAGCTCCCGACCATCACGCTTTGTGAGTTTCTGAAAATGGCCAAAGATGGTTTTTGGTAG 735 44.76 MATPDVVVQAEHDRFFDHTKGDAKSRGLALEKKIEYLESLNDRVSNRRARRWINDRILLELVPRLTGDEIRGLFAPPPFGDEAQPSAFSMTNVGEWDKFRNIDMDKEAGALEALKGLSSKKKSNVNADKIAALTAWHRVDCRTREAFRRSFLPELVNGFEVNIRAFVSEAANEEVLVMYAQDPFHRLLLHGVCEFYNLVSTTETETKGTKVLKMTKIKKKKAGKNELPTITLCEFLKMAKDGFW 244
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial12g02766 244 Gene3D - 150 241 IPR036867 GO:0003676(InterPro)
Bial12g02766 244 Pfam R3H-associated N-terminal domain 30 149 IPR025952 -
Bial12g02766 244 SUPERFAMILY R3H domain 136 215 IPR036867 GO:0003676(InterPro)
Bial12g02766 244 PANTHER R3H DOMAIN-CONTAINING PROTEIN 4 20 242 IPR039629 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial12g02766 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
184914 Bial12g02766 Bial24g02609
361565 Bial10g01362 Bial12g02766
363646 Bial12g02766 Bial22g00957
363647 Bial12g02766 Bial24g02609
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr10:13637955 Bial12g02766 Bial-Chr12:57732317 wgd
Bial Bial-Chr12:57732317 Bial22g00957 Bial-Chr22:9225892 wgd
Bial Bial-Chr12:57732317 Bial24g02609 Bial-Chr24:56841262 wgd