Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial12g02775 | ATGCCGGAGGCGTTGGCGAAGGACGCGATAATCTCGTGGTTCAGAGGCGAGTTTGCTGCGGCGAATGCGATAATTGACGCGTTGTGTGGCCATTTGTCGCAGTTTGAAGGCGGACGACGTGATTATGAGGCGGTGTTTGCCGCTATACACCGTCGTCGGTTGAATTGGATCCCGATTCTGCAGATGCAGAAGTTTTTTTCGATTGCGGATGTCACGACGGAGCTGCAGAAGGTGAAGGTGCAGGCGCCGGTGGTGGAGGTTAAACATGAAGTTGTTGTAGATGTTAATGGTAATGGTGATGGCGGTGGCGAGGTGGTTGATGATGATTCTGTTAAGGATTATTCGCCGAAGAGCGGGATTACTGATGCAGATACTCATGAAGTGCAGTCTACAGTGGAAAAAATTGAAATATGCTCAAACCAAGAAGATTGGGAGGCGAGGCGTGCTGAAATGAAGATAACAAAAGGGTTTACGGCTAAGGAGTCTGTTAAAGGGCATATGGTGAATATGGGGAGAGGGTTGAAGCTATATGATGACGTACTTAGCACGACTGAGCTTTCAAAGTTAACCGACTATGTAACCGATCTCCGAGCCGCTGGCCAAAATGGTGAACTCTCAGGTGAGACCTTTATCATGTACAATCAGCAGTCAAAGTTAATCAAGAGAGAGCTTATTCAGTTTGGAGCTCCTATATTTGGACAGATAAAAGATGATCAAGTTGCCGCTGCTAATAAATCCCAAGACAGCAATATCGACCCGATCCCTGCTCCTCTTGAAGGCGTCATTGATCATCTCATTCAGCTTCGCTTAGTTTCTGAAAATAGACGACCCAACAGTTGCATCATAAACTTTTTTGATGAGGGTGAATTTTCACAGCCGTTCTTGAAACCACCACATTTAGAGCAACCTATCTTGACACTTGTTCTATCCGAGTCAACAATGGCTTTCGGGCGTAGTCTAGTCTGTGACAATGATGGCAACTATAAAGGACCACTCATGCTTTCTCTCAAGGAAGGGTCACTATTAGTGATGAGGGGAAACAGTGCTGACATGGCACGCCACGCGATGTGCCAGTCTCCAACTAAGCGAATCAGCGTCACTTTTTTCAAAGTCCGAGTAGACAATAACCAACCCCCAAAAGATCCCATGGCCGGGGCCATGACCTTGTGGCAGCCTGGTCTTCCAACTCCCATATTAACAGGTGACTCAATTCATGCTGTTCCAAAATGGGCCCCGCAACTTCTTATGTTAGCACCGCTCTCGCCCATGGCTATGAGCCCAAGAAGGTTGCCACGTGGGGGGACTGGTGTTTTCTTACCCTGGAACAATGGGTCAAAAAAGCCGACTAAACATCTACCTCCTCGTGCTCAAAGGGGGAGGCTTTTGGCACTGCCTGCCCCCACTGAACCGCATAAAATGGACCGGTCCGCTGATTCTGGTATTAGTGTTGCTTGA | 1455 | 47.9 | MPEALAKDAIISWFRGEFAAANAIIDALCGHLSQFEGGRRDYEAVFAAIHRRRLNWIPILQMQKFFSIADVTTELQKVKVQAPVVEVKHEVVVDVNGNGDGGGEVVDDDSVKDYSPKSGITDADTHEVQSTVEKIEICSNQEDWEARRAEMKITKGFTAKESVKGHMVNMGRGLKLYDDVLSTTELSKLTDYVTDLRAAGQNGELSGETFIMYNQQSKLIKRELIQFGAPIFGQIKDDQVAAANKSQDSNIDPIPAPLEGVIDHLIQLRLVSENRRPNSCIINFFDEGEFSQPFLKPPHLEQPILTLVLSESTMAFGRSLVCDNDGNYKGPLMLSLKEGSLLVMRGNSADMARHAMCQSPTKRISVTFFKVRVDNNQPPKDPMAGAMTLWQPGLPTPILTGDSIHAVPKWAPQLLMLAPLSPMAMSPRRLPRGGTGVFLPWNNGSKKPTKHLPPRAQRGRLLALPAPTEPHKMDRSADSGISVA | 484 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial12g02775 | 484 | Gene3D | - | 157 | 377 | IPR037151 | - | |
| Bial12g02775 | 484 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED | 6 | 473 | IPR044842 | GO:0003729(InterPro)|GO:0006402(InterPro)|GO:0032451(InterPro) | |
| Bial12g02775 | 484 | Pfam | 2OG-Fe(II) oxygenase superfamily | 279 | 369 | IPR044861 | - | |
| Bial12g02775 | 484 | MobiDBLite | consensus disorder prediction | 462 | 484 | - | - | |
| Bial12g02775 | 484 | SUPERFAMILY | Clavaminate synthase-like | 165 | 368 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial12g02775 | K10767 | mRNA N6-methyladenine demethylase [EC:1.14.11.53] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 25266 | Bial12g02775 | Bial5g01013 | |
| 184921 | Bial12g02775 | Bial24g02617 | |
| 361576 | Bial10g01375 | Bial12g02775 | |
| 363658 | Bial12g02775 | Bial22g00968 | |
| 363659 | Bial12g02775 | Bial24g02617 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr12:57810650 | Bial16g00864 | Bial-Chr16:10880631 | dispersed | |
| Bial | Bial-Chr10:13791936 | Bial12g02775 | Bial-Chr12:57810650 | wgd | |
| Bial | Bial-Chr12:57810650 | Bial22g00968 | Bial-Chr22:9374184 | wgd | |
| Bial | Bial-Chr12:57810650 | Bial24g02617 | Bial-Chr24:56931218 | wgd |