AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial12g02876 ATGGGGGAAACTAAATCGGGGTCGGAGAACAGGTTGAAACCGTCTACGAAGTGTTCGGATGAGAATCAAGTGCAGTTAAAGTGTAGGAACAACAATGTGCAGTCGAATTTGAAACCGAGGTCGATTTGGGGTTCGAATATTGTGAAAGGGTTTTCGGGTGATAAAAAGACCAGATCGCAGCAAGTCGTGAAGAAATCGAATCCACCGCAGCCTCTTGCTAATGTCACCAACACGAATTCGAAAAACCCGTTTGCTCAGAATCGAGCGAAACGGTCGCTTATTGGGGATTTATCGTGTTCGGTCACTTCTACACAAGTTCATCCCCAAGGGGTCCAGCTGTATAAGTCATCATCTTCTTCGGGTTCTCGTGATCTGTTTTCCGAGCTTGATCAGCTCAGAAGCTTGCTTCAGGAATCTAAAGACAGAGAAGCTAAATTGCAGGCTGAGTTGTGTGATTTCAAGAAGAAAAATCTCAAGGCTTTGGAGCTTGAACGAACGGTTGAGTCGAAAACTAGTGAAATTGAAGCTCTTAAAAGCAAAGTTGATTTGCTTGAATCAGAAAACGCCAGTCTTTCCGAACAGTTGAATTCTCAGCAGTTGCAAGAAAATATAGCAAAGGGGGTTTCTAATAGTGTTGAGGTAGATGTTCTTAAGTTGAGAAGACTGAATGCTGAGCTTCATCTTCAGAAGAGAAATCTTTCTTTCAGAATTTCTTCAATGGAGTCCCAACTAGCTGCAATTGCCAAAGATTCTGAGAATGAATTTGTTGAGAAGATCAAAGCTGAGGCATCTATGCTCCGACAAACCAACGAAGATTTATGCAAACAAGTTGAAGATTTACAAGTAAGCCGATTGAACGAGGTTGAGGAGCTTGTCTATCTTAGATGGGTCAACTCGTGTCTCAAAAATGAGTTACAAAACTCAACTTTTGTGACCTCTGAAGTAACATCCAGTCCAGCTTCTGTTGAATCAAGTGATACAAGTTCTGACTATAGTAGTACCCAAAAAACATTAAACTTGATTAAGAAAATTAAAAAATGGCCCGTTCTTGATGAAGAAACGTGTTGGTCAGAAGGAAGAAGGCATTCAATCAGTGGAGCAAACTGCTGTCAAGAAGATCTGGTGGTGAACAAAAGAAGACAATCTGATGGTTTTATATGTTCAATGGAAATGGAGGGTATATCTGTAAATTCACAATTGCGTGAAGCTACAAAACTGAAAACATTTTTGGATGTTGAAAAAAGGGCGCTAAGGGTTCCTAACCCTCCTCCGAGGCCTTCTAGTTTTACTTCTAAGGAATGCATAGAGGTTAATGGTAAAGCACTACCACCACCACCGCCACCACCGCCGCCGCCTCCACCACCACCGCCACCAAAGTTCAATGCAAGAAGTAATGGTGGAGGGGTGGTTCAACGAGCTCCAGAAGTAGTCGAGTTTTATCATTCGCTTATGAAACGGGATTCTAGAAAAGATTCCATCAATGATGGGATTTGTGATGCTTTAGATGTTAATAATGTTAGAACAAGTATGATAGGTGAAATTGAAAATCGGTCTTCACATTTGCTTGCTATAAAGGAGGATGTTGAGACCCAAGGGGAATTTGTGAATTCTTTGATACATGAGGTTAACAATGCGGTTTATCCAGATATTGAAGATGTGGTGGCATTTGTTAAGTGGCTGGATGATGAACTTGGTTTTCTTGTGGATGAGAGGGCGGTTTTGAAGCACTTTGATTGGCCGGAGAAGAAAGCGGACACGTTAAGAGAAGCAGCGTTTGCATACCGAGATCTAAAGAAACTGGAGCATGAAATTTCAAATTACAAGGACAATTATCACATACCATGTGACCTGGCATTGAAGAAAATGGTTTCCGTGTCTGAAAAGATGGAGCGTATTGTTTATAATCTTCTTAGAACAAGAGACCCCTTGATGCGTAATTGCAAAGAATTTCATATTCCAACTGATTGGATGCTTGATTCAGGAATATTAAACAAGATTAAGTTGGGATCGGTTAAGTTGGCTAAGAAATACTTAAAAAGAGTTGCTACAGAGCTTCAAACGAAGGGAACACATGAGAAAGATTCTTCAATGGATTATATGCTACTTCAAGGAGTGAGATTTGCTTTCCGCATTCATCAGTTTGCTGGTGGATTTGACGTTGATACCATGCATGCTTTCGAGGAGCTTCGCAATGTAGCTCTTGTTTTGAACAAAAAGTAG 2220 40.9 MGETKSGSENRLKPSTKCSDENQVQLKCRNNNVQSNLKPRSIWGSNIVKGFSGDKKTRSQQVVKKSNPPQPLANVTNTNSKNPFAQNRAKRSLIGDLSCSVTSTQVHPQGVQLYKSSSSSGSRDLFSELDQLRSLLQESKDREAKLQAELCDFKKKNLKALELERTVESKTSEIEALKSKVDLLESENASLSEQLNSQQLQENIAKGVSNSVEVDVLKLRRLNAELHLQKRNLSFRISSMESQLAAIAKDSENEFVEKIKAEASMLRQTNEDLCKQVEDLQVSRLNEVEELVYLRWVNSCLKNELQNSTFVTSEVTSSPASVESSDTSSDYSSTQKTLNLIKKIKKWPVLDEETCWSEGRRHSISGANCCQEDLVVNKRRQSDGFICSMEMEGISVNSQLREATKLKTFLDVEKRALRVPNPPPRPSSFTSKECIEVNGKALPPPPPPPPPPPPPPPPKFNARSNGGGVVQRAPEVVEFYHSLMKRDSRKDSINDGICDALDVNNVRTSMIGEIENRSSHLLAIKEDVETQGEFVNSLIHEVNNAVYPDIEDVVAFVKWLDDELGFLVDERAVLKHFDWPEKKADTLREAAFAYRDLKKLEHEISNYKDNYHIPCDLALKKMVSVSEKMERIVYNLLRTRDPLMRNCKEFHIPTDWMLDSGILNKIKLGSVKLAKKYLKRVATELQTKGTHEKDSSMDYMLLQGVRFAFRIHQFAGGFDVDTMHAFEELRNVALVLNKK 739
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial12g02876 739 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 58 731 IPR040265 GO:0009658(PANTHER)|GO:0009707(PANTHER)
Bial12g02876 739 SUPERFAMILY Formin homology 2 domain (FH2 domain) 447 600 - -
Bial12g02876 739 MobiDBLite consensus disorder prediction 1 22 - -
Bial12g02876 739 Coils Coil 129 149 - -
Bial12g02876 739 MobiDBLite consensus disorder prediction 50 83 - -
Bial12g02876 739 MobiDBLite consensus disorder prediction 7 22 - -
Bial12g02876 739 MobiDBLite consensus disorder prediction 437 467 - -
Bial12g02876 739 Coils Coil 256 276 - -
Bial12g02876 739 MobiDBLite consensus disorder prediction 440 461 - -
Bial12g02876 739 MobiDBLite consensus disorder prediction 52 83 - -
Bial12g02876 739 Coils Coil 583 610 - -
Bial12g02876 739 Coils Coil 160 201 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial12g02876 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
184981 Bial12g02876 Bial24g02715
363734 Bial12g02876 Bial24g02715
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr12:58866450 Bial13g00327 Bial-Chr13:3768836 dispersed
Bial Bial-Chr12:58866450 Bial24g02715 Bial-Chr24:57861403 wgd