AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial13g00227 ATGGCTCTTTTGGAATCAAAGAACAGAGGTGAGGTCAGAATTCACGAAAGTCCGGAAGAACTCAGCACGGATTTGGCTGATTACATAGCAGAATTATCCGAAGCATCCGTTAAGGAACGTGGGTTTTTCGCTATTGCGTTATCTGGTGGTTCCGTAATTACCTTGTTGAGGAATCTTTGTGGAGCTCCTTATAACAAGACTGTCGATTGGTCGAAATGGTATATATTTTGGGCGGACGAACGCGTGGTTGCCAAGAGTCATGTTGATAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCTAAGTTGCCTATTGTTCCAAGTCATGTGCATTCCATCAACGACTCTCTAACCGCGGAAGAAGCTGCTAACGAATACGAGTTTATGATCCGACAACTGGTTAGGACCCGTGTGGTCAATGTGTCTGATGTGAGCGACTGCCCAAAGTTTGACCTAATCCTTCTAGGCATGGGACCAGATGGTCACGTGGCATCTTTGATGCCCGACCATCCAGTCCTTGAAGAAAAAAACGAATGGGTGACATTCATCACCACTTCCCCTAAACCACCACCCGAAAGAATCACCTTCACCCTCCCCGTCATCAACTCTGCCGCCAATGTGGCGGTGGTGGTGACAGGTGGGGTGAAAGCAGAGGCAGTCCGCTTGGCTATAGATGACGTGGGACCCGATTGCCCGGTGTTGCCAGCTAGGATGGTTGAACCAATTGTAGGGAAGTTGGTGTGGTTTTTGGATAATGAGGCTGCTTCAAAGCTTAAGGGCTTTGAACAATTTTCTTAA 798 47.12 MALLESKNRGEVRIHESPEELSTDLADYIAELSEASVKERGFFAIALSGGSVITLLRNLCGAPYNKTVDWSKWYIFWADERVVAKSHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFMIRQLVRTRVVNVSDVSDCPKFDLILLGMGPDGHVASLMPDHPVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGGVKAEAVRLAIDDVGPDCPVLPARMVEPIVGKLVWFLDNEAASKLKGFEQFS 265
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial13g00227 265 Gene3D - 7 261 - -
Bial13g00227 265 SUPERFAMILY NagB-RpiA-CoA transferase-like 12 259 IPR037171 -
Bial13g00227 265 NCBIfam 6-phosphogluconolactonase 14 258 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Bial13g00227 265 Pfam Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase 17 248 IPR006148 GO:0005975(InterPro)
Bial13g00227 265 FunFam Probable 6-phosphogluconolactonase 7 259 - -
Bial13g00227 265 CDD 6PGL 19 250 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Bial13g00227 265 PANTHER 6-PHOSPHOGLUCONOLACTONASE 6 258 IPR039104 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial13g00227 K01057 6-phosphogluconolactonase [EC:3.1.1.31]
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Event-related genes

Select Gene_1 Gene_2 Event_name
25456 Bial13g00227 Bial9g02642
183523 Bial1g00174 Bial13g00227
193366 Bial13g00227 Bial1g00174
364209 Bial13g00227 Bial20g00141
364210 Bial13g00227 Bial8g00376
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
679140 Bial Bial13g00227 Bial-Chr13:2539079 Bial24g01007 Bial-Chr24:37531004
772269 Bial Bial1g00174 Bial-Chr1:1757130 Bial13g00227 Bial-Chr13:2539079
799872 Bial Bial13g00227 Bial-Chr13:2539079 Bial20g00141 Bial-Chr20:1605283
801700 Bial Bial13g00227 Bial-Chr13:2539079 Bial8g00376 Bial-Chr8:4159054
802068 Bial Bial13g00227 Bial-Chr13:2539079 Bial9g02642 Bial-Chr9:71262555