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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial14g01357 ATGGGATCTCCGGGTGAATGGTCAGTGGAACACAGAGCTCCGATGAGGAATGAATCATCGTCATCGGTGGCGAGTGAGTTCGTAGCTGAAAGCGGGTGCCTTTCGATCATCGTGCTGGGTGCTTCTGGTGATCTCGCCAAGAAGAAGACCTTCCCTGCGCTCTTTCATCTTTATCGCCAGGGCTTCATTCAGTCCCACGATGTTCATATCTTTGGTTACGCCAGAACCAACATTCAACACCAGGATTTGAGAGATCGTATTCGAGGGTATCTTACGCCATGCAAAGGTTTTGAGGAGACACATGACGAAGCTGTAACTCAGTTTCTTCAATTGATCAAATACGTAGCTGGTGCTTATGATACCGAGGAGGGATTTCGTTTGTTAGACAAGGAAATATCTGAGTATGAGCTGTCAAAAAACAGTAGTGAAGGATCTTCTAGAAGACTCTTCTACCTCGCTCTCCCACCGTCTGTATATCCATCCGTCTGCAAAATGATAAGAAATTATTGCATGAATAAATCGGATCTTGGTGGTTGGACTCGGATTGTTGTTGAGAAACCGTTTGGTAAGGATTTGGATTCTGCTGAAGAACTCAGCTCTCAAATTGGAGAATTATTTGATGAACCACAAATATACCGTATTGATCATTATTTAGGAAAAGAGTTGGTGCAAAACTTGATGGTACTTCGTTTCGCAAATCGTTTCTTCTTGCCACTATGGAACCGTGACAACATCTCTAATATACAGATTGTGTTTAGAGAGGATTTTGGAACTGATGGCCGTGGAGGGTACTTTGATCAATACGGAATCATCAGGGACATCATCCAAAATCATCTGTTACAAGTCCTTTGCCTAGTTGCTATGGAGAAGCCTGTTTCTTTAAAACCAGAGCATGTTCGAGACGAGAAAGTGAAGGTTCTCCAATCTGTTCTTCCAATTGAAGACAGTGAAGTTGTGCTTGGACAATATGATGGATATACAGATGATCCAACGGTTCCCGATAACTCAAATACTCCCACTTTTGCAACCATGATTCTCAGAATTCATAATGAAAGATGGGAAGGTGTTCCGTTTATTATTAAGGCAGGGAAAGCTTTGAATTCAAGAAAGGCAGAAATCCGGGTGCAATTTAAGGAAGTTCCTGGTGACATATATAAATGTCAAAAACAAGGCAGAAACGAGTTTGTGATTAGACTTCAACCTTCAGAGGCCATGTACATGAAGCTAACTGTTAAGCAACCCGGGCTTGAAATGAAGACGGTTCAGAGTGAATTGGATTTGTCGTATAGGCAGCGGTATCAAGGAACCATAATTCCCGAGGCTTATGAACGTCTGATTCTTGACACAATAAGAGGCGACCAACAGCATTTTGTCCGCAGAGATGAGTTAAAGGCGGCTTGGGAGATTTTTACACCGCTTCTGCACAGAATTGATAGAGGTGAAATGAAACCGCTTCCATACAAGCCCGGAAGCAGAGGGCCGGAGGCAGCGGATAAGCTGGCTGAAAATGTGGGATTTGTTCAAACTCATGGATACATATGGATACCTCCAACCTTGTAG 1560 43.21 MGSPGEWSVEHRAPMRNESSSSVASEFVAESGCLSIIVLGASGDLAKKKTFPALFHLYRQGFIQSHDVHIFGYARTNIQHQDLRDRIRGYLTPCKGFEETHDEAVTQFLQLIKYVAGAYDTEEGFRLLDKEISEYELSKNSSEGSSRRLFYLALPPSVYPSVCKMIRNYCMNKSDLGGWTRIVVEKPFGKDLDSAEELSSQIGELFDEPQIYRIDHYLGKELVQNLMVLRFANRFFLPLWNRDNISNIQIVFREDFGTDGRGGYFDQYGIIRDIIQNHLLQVLCLVAMEKPVSLKPEHVRDEKVKVLQSVLPIEDSEVVLGQYDGYTDDPTVPDNSNTPTFATMILRIHNERWEGVPFIIKAGKALNSRKAEIRVQFKEVPGDIYKCQKQGRNEFVIRLQPSEAMYMKLTVKQPGLEMKTVQSELDLSYRQRYQGTIIPEAYERLILDTIRGDQQHFVRRDELKAAWEIFTPLLHRIDRGEMKPLPYKPGSRGPEAADKLAENVGFVQTHGYIWIPPTL 519
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial14g01357 519 PIRSF G6PD 14 511 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 Gene3D Dihydrodipicolinate Reductase; domain 2 214 509 - -
Bial14g01357 519 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 33 516 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 PRINTS Glucose-6-phosphate dehydrogenase signature 181 194 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 PRINTS Glucose-6-phosphate dehydrogenase signature 205 233 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 PRINTS Glucose-6-phosphate dehydrogenase signature 257 274 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 PRINTS Glucose-6-phosphate dehydrogenase signature 352 378 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 PRINTS Glucose-6-phosphate dehydrogenase signature 275 291 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 37 225 IPR022674 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 215 221 IPR019796 GO:0004345(InterPro)|GO:0006006(InterPro)
Bial14g01357 519 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 215 512 - -
Bial14g01357 519 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 227 505 IPR022675 GO:0004345(InterPro)|GO:0006006(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 30 514 IPR001282 GO:0004345(PANTHER)|GO:0005829(PANTHER)|GO:0006006(PANTHER)|GO:0006006(InterPro)|GO:0009051(PANTHER)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 Gene3D - 32 213 - -
Bial14g01357 519 FunFam Glucose-6-phosphate 1-dehydrogenase 215 508 - -
Bial14g01357 519 NCBIfam glucose-6-phosphate dehydrogenase 35 505 IPR001282 GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro)
Bial14g01357 519 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 228 IPR036291 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial14g01357 K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
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Event-related genes

Select Gene_1 Gene_2 Event_name
192371 Bial14g01357 Bial2g01737
193273 Bial14g01357 Bial5g03070
367109 Bial14g01357 Bial2g01737
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr12:34033861 Bial14g01357 Bial-Chr14:25334506 dispersed
Bial Bial-Chr14:25334506 Bial24g00787 Bial-Chr24:33177149 dispersed
Bial Bial-Chr14:25334506 Bial18g03258 Bial-Chr18:81195106 wgd
Bial Bial-Chr14:25334506 Bial2g01737 Bial-Chr2:29232329 wgd
Bial Bial-Chr14:25334506 Bial5g03070 Bial-Chr5:76821309 wgd