AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02475 ATGGCGTTTCCAATATTTGCTGGAAATCTATACCTATCAATTAGGACTCCTAATTCTAAGGAAAAGAACATCGATTCACAAGGTCCGGATGACGTGAACAATGATACCATACCATCAGCATCAGTGCTAAAGCAGTTAGCCATAGGTGTTGAGACCACAAAAATTGTAAAGTCAATGAAGGATTTGATGATATTAGCTAGAGATTATTCACCAGCGAAACAGAAATCCGGTTTGAGTTTATCTGCCGTCAAGTCTTTCGTTGTTGGTGAGAAAGAAGATAAGTTCGCTGCTGATTTTGGTCGTTACGAAAAAGTAATGTCTTTTATGCATTCCCTCACGGATCCAGAAGGACATATTTCAAAGAGGAAAACAAAATCTCGTTTGGATAAAACGACAGCCATTACTAAGTATTTCAAAGAACTTCATGGTGCACCACCAGACAGCTTTGTTCCCGAGCTTGCTGAAGCGATGGGAAGCATTAAAACTTTGAAGAAAATGGCGTTGTTTTGGTGTACGGTTGTTATGGAACTGAGAAATATATGGAGTGAAGGAAAACATATTCCTGGAATCCCAACAGATGAAATACCAAATTTAAACACCTGTCTCTTACATCAACAGTTACAGGTTATCAACTGTTGTGTTTCTAGGAAACGACGTCGTGCTATTGCCACTGCGTCATTAGATTCTGTTCTGAAACAAGCCGATGATAATGCTGGCGTGTCACGTCCTTCTAAGGATATCATTCCAGAAAGCCCTGTTATGTATGCTCGAGATAACTCTGGGAAGTTCGTGCTTCGGTTAGGAGCTGATAAACGACTTGAAAACACAACTTTGTTGGATACCGGTGAGCCTGTGTACACACCGGTGATGCAGGAATGGCCTTTGCTCACAGAAGATGTTATAAAAGAAACCGAAGAATTTGTATTACGTACAGGGAGTGTTGGTGCAGGGTGTTCTCAGCTTCTATCTGATATGCAGGCTTTCAAGGCAGCAAATCCAGGGTGCATATTAGAAGATTTTGTAAGATGGCATTCGCCTCCTGATTGGACGGAAACTTGTGATGACGGTAAAGATGTTACGGTTGGTGATAATTCGCCTTCTAGAGGACACCTGAGTACACGTATGCAGAAAGAAGGTAATTTGTGGTTAGAATTATGGAAAACCGCAAAACCGATACCTGCTGTTAGACAGTCTCCATTATACTATGAGGATTTATCTGTGTAA 1224 41.01 MAFPIFAGNLYLSIRTPNSKEKNIDSQGPDDVNNDTIPSASVLKQLAIGVETTKIVKSMKDLMILARDYSPAKQKSGLSLSAVKSFVVGEKEDKFAADFGRYEKVMSFMHSLTDPEGHISKRKTKSRLDKTTAITKYFKELHGAPPDSFVPELAEAMGSIKTLKKMALFWCTVVMELRNIWSEGKHIPGIPTDEIPNLNTCLLHQQLQVINCCVSRKRRRAIATASLDSVLKQADDNAGVSRPSKDIIPESPVMYARDNSGKFVLRLGADKRLENTTLLDTGEPVYTPVMQEWPLLTEDVIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTETCDDGKDVTVGDNSPSRGHLSTRMQKEGNLWLELWKTAKPIPAVRQSPLYYEDLSV 407
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02475 407 Pfam Rab3 GTPase-activating protein catalytic subunit 266 403 IPR026147 -
Bial16g02475 407 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 32 405 IPR045700 GO:0005096(InterPro)|GO:0005096(PANTHER)|GO:0043547(InterPro)|GO:0043547(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02475 K18270 Rab3 GTPase-activating protein catalytic subunit
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Event-related genes

Select Gene_1 Gene_2 Event_name
189198 Bial4g03047 Bial16g02475
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:64228149 Bial20g02585 Bial-Chr20:68420876 dispersed
Bial Bial-Chr16:64228149 Bial4g03047 Bial-Chr4:69574970 wgd