AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02527 ATGGCTTCATCTTCTTCAATCTCATTCACCTTCAAACCCTTAATCATCATATTAATCATATTAATAATTAGTTATACTTACAGTCCAAAAGCAGTTGCTTTTAAGCCACTAATTCGACCAACTGACATCCTCCCACTTTTGCCACGCCAAGTCTCTTGGCCGATCCTCAACTCGCTCCGTGGCGCCGCTGATCTCCTCCCGAGCTTTGTCGGGGCCGCCGCGGTTGCGAATAACTCGGGTTTGCATTGGAAAGGGTCTTGTTTTTATGAGAATAGTGCGTGGTTGGAGTTGCATAATAAAAGTGGGACTGAGTTTGGTGGTGGCACTCTTCATATTAAGGTAAGCAATGCACACAGTTGGACATGTATGGATATTTATGTCTTCGCGACTCCATATCGTGTGACATGGGATTATTATTTTCTATCCCGTGAGCATACGCTCGAGTTCGATGAATGGAGCGGGAAAGCTGAGTACGAATATGTAAAACACAAAGGCATTTCAATTTTTCTAATGGAAGCCGGAATGATAGGAACTTTAGAAGCATTATGGGAGGTTTTCCCATTATTCACAAACACGGGTTGGGGTGAAAGTTCCAATCTTGCGTTTCTCAAGAAACATATGGGAGCTACTTTTGAGGCCCGGCCCGAACCATGGGTAACAAACATAACCGAGGACGATATTCATTCGGGGGACTTTCTTGCAATATCAAAGATTCGTGGTAGATGGGGCGGGTTTGAAACGCTAGAAAAATGGGTATCCGGGGCTTACGCGGGCCATTCGGCTGTTTGCTTGAGGGACCCGGAAGGTAAACTATGGGTTGGTGAATCTGGACATGAAGATGAAGATGGTCAAGATGTTATCGCTTTGTTGCCGTGGGACGAGTGGTGGGATTTTGAGTTGAACGAAGATGATTCGAATCCACATATAGCTTTGCTTCCTTTGCATCCTGATCTACGAGCCAAATTTAATGAAACTGCTGCTTGGGAGTATGCACAAAGTATGGTCGGGTTACCGTACGGTTACCATAATTTGATATTTAGTTGGATAGATACTATCAGTGACAATTATCCACCGCCTTTGGATGCTAATCTGGTTGCATCTGTGATGACTGTGTGGGATCAAATGCAGCCTGCATACGCGGCTAATATGTGGAATGAAGCCTTGAATAAGCGGCTTGGTACCCAGGGGCTCGAACTTGCTGATATTTTAGTGGAAGTTGAAAGACGTGGTTCGTCGTTTGCTGAATTATTAACTATACCTGAACAAGATGATTGGGTATACGCGGATGGAAAGTCGACTTCTTGTGTTGCGTTTGTTCTTGAAATGTACAAAGAAGCAGGACTCTTTGGAGATCTTGCAGATCAAATTCAAGTTACCGAGTTCACAATTAAGGATGCTTACACGCTTAACTTTTATGAAAACACTTCGAGCCGACTGCCAAAGTGGTGTAACGAAGGTGACACGGTTGAGTTACCATTTTGTCAGATTAAAGGAAAATATCGGATGGAGTTACCTGGGTACAATACCATTGACCCGTACCCGCATATGACTGAGAGTTGCCCGTCACTGCCCCCGGATTATGAAAGACCTCAATACTGTTGA 1602 44.26 MASSSSISFTFKPLIIILIILIISYTYSPKAVAFKPLIRPTDILPLLPRQVSWPILNSLRGAADLLPSFVGAAAVANNSGLHWKGSCFYENSAWLELHNKSGTEFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWSGKAEYEYVKHKGISIFLMEAGMIGTLEALWEVFPLFTNTGWGESSNLAFLKKHMGATFEARPEPWVTNITEDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPEGKLWVGESGHEDEDGQDVIALLPWDEWWDFELNEDDSNPHIALLPLHPDLRAKFNETAAWEYAQSMVGLPYGYHNLIFSWIDTISDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTQGLELADILVEVERRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLADQIQVTEFTIKDAYTLNFYENTSSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTIDPYPHMTESCPSLPPDYERPQYC 533
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02527 533 Gene3D endopeptidase domain like (from Nostoc punctiforme) 220 462 - -
Bial16g02527 533 PANTHER OS01G0793500 PROTEIN 8 533 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02527 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
26033 Bial14g00897 Bial16g02527
28235 Bial16g02527 Bial2g01236
189225 Bial4g03127 Bial16g02527
363264 Bial12g02277 Bial16g02527
368924 Bial16g02527 Bial24g02136
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
677578 Bial Bial12g02277 Bial-Chr12:53082557 Bial16g02527 Bial-Chr16:65678249
682791 Bial Bial14g00897 Bial-Chr14:12165406 Bial16g02527 Bial-Chr16:65678249
689832 Bial Bial16g02527 Bial-Chr16:65678249 Bial24g02136 Bial-Chr24:51935798
814211 Bial Bial16g02527 Bial-Chr16:65678249 Bial4g03127 Bial-Chr4:71762162