AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02552 ATGAAAGAGAACATGGAGGATATGTTTGTGGCAATCATTTCAATGCTTCTTCTCGTTGCGTTGGTTCCGCTTTACCTGTGGAAACGCCGGCAGGCGGAGCCGTCTCGTGATGAGCACGAAGAGCAACCGCAGGTGCAGCAGAGAGAAGCGGTTGTGAGACCGACCGGTGCGCGGAGTAGGATGCGTAGGAGGAATGCTTCGGCTGCGAGTACATCTTCTGCTGCTCCACAAACTGTTGAAGAAACTGAGGATGGAAGTGATGAAGAAGCTGTTGAAGGGGAATATTATAATGCAAAAGCATCAAAGAAGAAAGGAAGGAAGAAAGAAGAGCGCCAAGCACAACGCCAGGCTGACGAGGCTGCACGTGAATTGAAAAATACAAAACAAGATCGTTATGCAGAAATGCGCAGGAGGAAAGATGAGGAACATGAAGCAAGGGAACGGATGCTGGAAGAAGAAGCTGAGGCTCGAAGGCTTAAAGAGGAGGAAGCAGCAGCTTTAGAGTTTGATAAATGGAAAGGAGAGTTTTCAGTAGATGCTGAAGGTACCACAGAAAATGAACTTCAAGATGGAACACAGGGTTTGCTTTTTGATTTTGTCGAGTACATCAAGAAACAGAAATGCGTTCCATTGGAAGACCTTGCTGCAGAATTTAAACTAAGGACTCAGGACTGTATCAATCGAATCGCCTCATTGGAAGATATGGGGAGATTGTCGGGTGTGATGGACGACAGAGGAAAATACATATACATCTCACATGAAGAAATGCAGGCAGTTGCAGACTATATCAAGCGCGAAGGTCGTGTCAGCATTGCACATCTAGCAAGCCAGTCAAATCAGTTCATAGATTTGGAACCCAAATCACAGTTTGTTGAGGATTTAGGCATCGCGGATGAGATTACAGTTGCTTAA 912 45.83 MKENMEDMFVAIISMLLLVALVPLYLWKRRQAEPSRDEHEEQPQVQQREAVVRPTGARSRMRRRNASAASTSSAAPQTVEETEDGSDEEAVEGEYYNAKASKKKGRKKEERQAQRQADEAARELKNTKQDRYAEMRRRKDEEHEARERMLEEEAEARRLKEEEAAALEFDKWKGEFSVDAEGTTENELQDGTQGLLFDFVEYIKKQKCVPLEDLAAEFKLRTQDCINRIASLEDMGRLSGVMDDRGKYIYISHEEMQAVADYIKREGRVSIAHLASQSNQFIDLEPKSQFVEDLGIADEITVA 303
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02552 303 SMART DDRGK-2 98 283 IPR019153 -
Bial16g02552 303 FunFam DDRGK domain-containing protein 1 194 251 - -
Bial16g02552 303 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 52 294 IPR050899 -
Bial16g02552 303 Gene3D - 194 251 IPR036388 -
Bial16g02552 303 Coils Coil 103 130 - -
Bial16g02552 303 SUPERFAMILY Winged helix DNA-binding domain 190 259 IPR036390 -
Bial16g02552 303 MobiDBLite consensus disorder prediction 33 149 - -
Bial16g02552 303 MobiDBLite consensus disorder prediction 64 80 - -
Bial16g02552 303 Coils Coil 132 162 - -
Bial16g02552 303 MobiDBLite consensus disorder prediction 110 149 - -
Bial16g02552 303 Pfam DDRGK domain 98 283 IPR019153 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02552 K23344 DDRGK domain-containing protein 1
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Event-related genes

Select Gene_1 Gene_2 Event_name
189247 Bial4g03153 Bial16g02552
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
814233 Bial Bial16g02552 Bial-Chr16:66118987 Bial4g03153 Bial-Chr4:72201616