AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02569 ATGGAGTCGATACTGGCTCGAGCGTTGGAGTATACGCTCAAGTACTGGCTCAAATCATTCACCAGAGATCAGTTCAAGTTACAAGGACGCACCGTTCAGCTCTCCAATTTAGATATAAACGGTGATGCTTTGCACGCAAGTCTCGGATTGCCTCCTGCGTTGAATGTGACAACTGCAAAAGTCGGGAAGTTAGAGATTATACTCCCTTATTTCAGCAATGTCCAAGTTGAGCCAATTGTTGTGCAAATCGATAAGCTTGATTTGGTATTGGAGGAGAATGATGATTTGGATGCATATGCAAGTACAGAGAGTGCACAAACGCCATCTAGTCCTGCAAAAGGTAGTGGATATGGATTTGCTGACAAGATTGCAGATGGAATGACATTGGAGGTACGAACTGTTAATCTTTTACTCGAAACTCATGGAGGTGCTAGACGGCGTGGAGGAGCAACTTGGGCATCACCAATGGCATCCATTACTATTCGCAATCTCTTGCTTTATACTACAAATGAGAACTGGCAGGTTGTAAACCTTAAGGAAGCCAGGGACTTCTCCAATGACAAGAAGTTTATCTACGTTTTCAAAAAGCTTGAATGGGAGCATCTATCAATTGACCTCTTGCCTCATCCTGATATGTTTGCAGCTTTTGCTGAAGGCGCGTTTAAGGATGATGATGGTGCTAAGCGAGTGTTTTTTGGTGGGGAGCGGTTTCTTGAAGGAATATCGGGAGAAGCTTATATTACCATACAAAGAACAGAGCTTAATAGTCCATTAGGTTTGGAACTCCAGTTACATATTACTGAAGCAGTGTGCCCAGCTTTGAGTGAGCCAGGATTACGAGCTCTTCTTCGCTTCTTTACGGGATTGTATGTCTGTCTAAATAGAGGAGATGTGAATCCAAATGCTCAAGAGCGATCAGCAGAAGCTGCAGGGCGTACACTGGTCTCTATTGTGGTGGACCATATATTTTTTTGCATTAAGGATACTGATTTCCGGTTAGAACTTTTGATGCAGTCACTTTTCTTTTCTCGGGCAAGTCTTTCTGATGGAGAAATCACCAAATGCTTAACTCGGGTGATGATAGGTGGTCTGTTTTTGCGGGACACTTTCTCTAGCCCACCATGTGCATTAGTGCAACCAGCGATGCAGGATACTACAGATGAACCGCTTCACATCCCAGTTTTTGGAAAAGATTTCTGTCCTCCAATATACCCTTTAGGGGATCAGCAATGGAAAGTAAATGACCATGCTCCACTCATATCCCTCCATAGTCTCCAGTTTATTCCTTCACCTAAACCTCCATCTTTCTCTTCACAAACTGTCATCGACTGCCAGCCTCTTATGATACATCTCCAAGAAGAATCTTGTCTAAGAATATCATCCTTACTAGCTGATGGAATTTTGGTCAACAATGGTGACATTATACCCAACTTCTCGGTCAACTCATTTGACTTCAAAGTCAAAGGATTAGACGTCACTGTTCCAATGGTCAATGAGAGTTCCTTCACTGGAGCAAGGCTTCATATTGAAAACTTATACTTTCAAGACTCTCCTTCCCTACGCCTCAAACTACTTAATCTTGAAAAAGATCCTGCGTGCTTCTGTTTATGGAAAGGTCAACCCATTGACTCCAGTCAAAAGAAGTGGACAAGTGGCGCTTCTCTTATAAACATGTCTCTAGAAACATATAACAATAATAACTCGAATAAAGTTAACGGTTCCCGCTCACACTCTTCATTTTTGTGGAGATGTGTAGAGATGAAAGGCGTTTGTGTTCAGGTGGCAATGGTAACCGCAGATGGAAGCCCGCTAACGGACATACCTCCCCCGGGAGGTGTTGTTAGGGTTGGAGTCGCGTGTGAACAATATATCTCGAACACGTCTGTTGAACAGTTATTCTTTGTGCTGGATCTTTATACGTATTTTGGTACAGTCAGCGAAAAAATGGCGATGGTGGGAAAAGATAAACGAAAAAAGTCGATTAAACGTGAGTTGTCGGATGGAAGTTTGATTGAAAAGGTTCCTGGTGATACAGCTGTTAGCCTATCGGTTAAGGATCTAAAGCTAACGTTTCTAGAAACTTCTAATTTGGATATTCAAGGAATGCCTTTAGTTCAGTTTGTTGGTGATGATTTGTTCATGGAAGTTACTCATAGGACCTTGGGTGGGGCAATGGCTATTTCATCAAATTTAAGGTGGGACCGGGTCCAGGTGGACTGTACAGAAACTGAGGGTAACTCGATAAATGCAAATGGTAAACTGAGAGCTGTATTTTGGGTGCAAAATGGAAGGAAGATTCCATTTTTGGATTTACGTATGGTGCATGTTATTCCGTATAATGCACAGGATACCGAGTGTCATAGTTTGAGTGTGTCGGCATGTGTAGCGGGTGTACATCTGGCAGGTGGAATGAACTATGCTGAAGCTTTGCTTCACCGGTTTGGAATTCTGGGCCCAGATGGTGGGCCAGGGGTTGGGCTTTCTAAGGGCTTGGAGCATTTATCATCTGGTCCGTTTTCAAAGCTTTTCAAAGGTTCACCTCTGCTAGATAGTAAAAGTGAAAGCATAGAGGAAGATAAGAATAGTGGTTACTTGCAGTTGGGTCCACCAGATGATGTGGACGTATCACTAGAATTAAACGACTGGTTATTTGCATTGGAAGGTGCTGACATGGAAGAAAAATGGCGGTCCTACAACTCAGAAGATTCTTACCGAGAAGAAAGTTGCTGGCACACAACTTTTGACAGTTTAAAAGTCAAAGCAAACAGCAGCAAGAAACACTCAGTCAATAACAAAAAGATATTCCCTGGAGCATTGAAGTATCCTGTTGAATCAGTAACGGTTGGTGTTGAAGGCTTGAAGACATTAAAACCCCAGATCCAAAAAGTAATTGCAACCTCAAACGGGCACAAGCAAACTGTAGAGTCACATGGTGGGGTTGATCTTGAAGCCGACATAGTATTGAATGAAGATGATGGTGCCCACGGCGCGATCAAATGGGTAGTTGAAAGTTTAAAGTTTTCTGTGAAGCAACCGGTTGAAGCTGTTGTAACCAAGGATGAACTACAACATGTTGCTCAATTATGCAAGTCGGAAGTGGATTCCATGGGGCGAATAACTGCTGGTGTTTTGCGTGTGTTAAAGCTGGAAGGATCAGTTGGTCAGACGGCAATGAATCAACTAAGCAACCTCGGAAGTGAAGGATTTGAAAATATATTCTCGAGCAAAGATAGTAACGGTTTGATTCCCTCTTCACTTTTGGCTCCAAATAACCGGCAACCTTCTTCACCCGATCCAACATTAACTTCACTCGAGGCTGCATTATTAGATTCACAATCAAATTGTGCAGCCCTTGTGGCGGAATTAAGCAGTTCGGAATCGTCCAAACTACACCTTGATAGTGTAGAACAACTTGCCCAGAAACTGGAGAGTATGCAGAAACTGTTATCAGAGTTGCAGACTCGGGTATAG 3471 42.87 MESILARALEYTLKYWLKSFTRDQFKLQGRTVQLSNLDINGDALHASLGLPPALNVTTAKVGKLEIILPYFSNVQVEPIVVQIDKLDLVLEENDDLDAYASTESAQTPSSPAKGSGYGFADKIADGMTLEVRTVNLLLETHGGARRRGGATWASPMASITIRNLLLYTTNENWQVVNLKEARDFSNDKKFIYVFKKLEWEHLSIDLLPHPDMFAAFAEGAFKDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLELQLHITEAVCPALSEPGLRALLRFFTGLYVCLNRGDVNPNAQERSAEAAGRTLVSIVVDHIFFCIKDTDFRLELLMQSLFFSRASLSDGEITKCLTRVMIGGLFLRDTFSSPPCALVQPAMQDTTDEPLHIPVFGKDFCPPIYPLGDQQWKVNDHAPLISLHSLQFIPSPKPPSFSSQTVIDCQPLMIHLQEESCLRISSLLADGILVNNGDIIPNFSVNSFDFKVKGLDVTVPMVNESSFTGARLHIENLYFQDSPSLRLKLLNLEKDPACFCLWKGQPIDSSQKKWTSGASLINMSLETYNNNNSNKVNGSRSHSSFLWRCVEMKGVCVQVAMVTADGSPLTDIPPPGGVVRVGVACEQYISNTSVEQLFFVLDLYTYFGTVSEKMAMVGKDKRKKSIKRELSDGSLIEKVPGDTAVSLSVKDLKLTFLETSNLDIQGMPLVQFVGDDLFMEVTHRTLGGAMAISSNLRWDRVQVDCTETEGNSINANGKLRAVFWVQNGRKIPFLDLRMVHVIPYNAQDTECHSLSVSACVAGVHLAGGMNYAEALLHRFGILGPDGGPGVGLSKGLEHLSSGPFSKLFKGSPLLDSKSESIEEDKNSGYLQLGPPDDVDVSLELNDWLFALEGADMEEKWRSYNSEDSYREESCWHTTFDSLKVKANSSKKHSVNNKKIFPGALKYPVESVTVGVEGLKTLKPQIQKVIATSNGHKQTVESHGGVDLEADIVLNEDDGAHGAIKWVVESLKFSVKQPVEAVVTKDELQHVAQLCKSEVDSMGRITAGVLRVLKLEGSVGQTAMNQLSNLGSEGFENIFSSKDSNGLIPSSLLAPNNRQPSSPDPTLTSLEAALLDSQSNCAALVAELSSSESSKLHLDSVEQLAQKLESMQKLLSELQTRV 1156
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02569 1156 PANTHER UNCHARACTERIZED 1 745 IPR026728 -
Bial16g02569 1156 Coils Coil 1135 1155 - -
Bial16g02569 1156 Pfam VPS13-like, N-terminal 1 103 IPR026854 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02569 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
26038 Bial14g00904 Bial16g02569
28237 Bial16g02569 Bial2g01243
189259 Bial4g03171 Bial16g02569
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
682796 Bial Bial14g00904 Bial-Chr14:12235210 Bial16g02569 Bial-Chr16:66394813
689860 Bial Bial16g02569 Bial-Chr16:66394813 Bial2g01243 Bial-Chr2:15672943
814239 Bial Bial16g02569 Bial-Chr16:66394813 Bial4g03171 Bial-Chr4:72517489