AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02584 ATGATGGCTAGCACACAACTTTTGGTTGTATCAGAAGATCACACTCCACATAAATGGCGCGTTCCTTTAAAAGAAGATGTTTTTGGTGCATTTATGGCAAAAGGAGGTCCGGTTATGCATAAGGTTTTTGGTGATAAATCATTGTTTGGACCGTTATTGTTTAAGAAGTTCTTTGATCCATCGGACGCGTTTCCAATTTGGGAATTTGAACCAAGTGTGTTGTTGTCGGATCTTCAGAACCCGTGTGTGGATTGGTTTCAAACAGAAGCATGTTATGTCCTAAAAACCGAATTATCAGAAATAGATAAAAGCAGCCTTCGAGTTTATGTTGAGAATGGGAAAGTTATGGAGATTAGCGGACTATGGAACCACAAAGGCGAATCACGAGCATCATTGGACTGGCGAAGTGGCAATTGGTGGGAACGAGGCTTCGTACGAAGGCTAGAATTGCCTGAAAATGTCGATTGGAAGAGAATCGAGGCGTATGTGACCAACAATACCAATTTGGACATTAGACTTCCAAAAACTTCAACTGAATGTAATGTCCAGCAGTGA 555 41.26 MMASTQLLVVSEDHTPHKWRVPLKEDVFGAFMAKGGPVMHKVFGDKSLFGPLLFKKFFDPSDAFPIWEFEPSVLLSDLQNPCVDWFQTEACYVLKTELSEIDKSSLRVYVENGKVMEISGLWNHKGESRASLDWRSGNWWERGFVRRLELPENVDWKRIEAYVTNNTNLDIRLPKTSTECNVQQ 184
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02584 184 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 73 184 IPR002068 -
Bial16g02584 184 Pfam Hsp20-alpha crystallin family 85 179 IPR002068 -
Bial16g02584 184 Gene3D - 51 183 IPR008978 -
Bial16g02584 184 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 1 183 - -
Bial16g02584 184 SUPERFAMILY HSP20-like chaperones 58 178 IPR008978 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02584 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189267 Bial4g03182 Bial16g02584
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
689872 Bial Bial16g02584 Bial-Chr16:66720216 Bial12g01481 Bial-Chr12:44250222
814246 Bial Bial16g02584 Bial-Chr16:66720216 Bial4g03182 Bial-Chr4:72806430