AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02634 ATGCACCCAGACGATCACAAACCCTTACCGGACTCCGACCTGCCACCACTCGCCGCCATCAAACTCAAACCCACCACCACCCCCACCACCCCCACTCCCGCCACCCCCACCACCACCGCCCAACGCCGCATCGGCATCGCCGTCGACCTCTCCGACGAGTCCGCCTTCGCCGTCAAGTGGGCCGTCACCCACTACCTCCGCCCCGGCGACGCCGTCATCTTAATCCACGTCAGACCCACCTCCGTCCTCTACGGCGCCGACTGGGGCTCCGTTGACTCATCAATCGTAAACATCGACACTGACAACGAAGAGTCCAAAACCCGACTGGAACACGAGTTTAATACCTTCACAAATACTAAATCATTAGCTTTAGCACAGCCTTTAATCGACGCGGGTATACCGTACAAGATACATATTGTGAAGGATCATGATATGAAGGAGAGGCTGTGTTTGGAGGTGGAGAGGCTCGGGTTGAGTGCGGTTATTATGGGGAGTCGAGGGGTTGGGGCGAGTAAGCGAGGGAGTGATGGGAGGTTGGGTAGTGTTAGTGATTATTGTGTTAGGCATTGCGTGTGTCCGGTTGTTGTTGTGAGGTATCCGGATGAGAAGGAGGCGGGGGCGAGTGAGGCGGTTGTGTCGGTGGCGAGTGCGGAGGATGAGGAAGAGGAGGAGGTGGAGGTTGGTGGTGCGGATGAGGAGCGGAAATGGTAA 711 57.1 MHPDDHKPLPDSDLPPLAAIKLKPTTTPTTPTPATPTTTAQRRIGIAVDLSDESAFAVKWAVTHYLRPGDAVILIHVRPTSVLYGADWGSVDSSIVNIDTDNEESKTRLEHEFNTFTNTKSLALAQPLIDAGIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGVGASKRGSDGRLGSVSDYCVRHCVCPVVVVRYPDEKEAGASEAVVSVASAEDEEEEEVEVGGADEERKW 236
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02634 236 PRINTS Universal stress protein signature 176 198 IPR006015 -
Bial16g02634 236 PRINTS Universal stress protein signature 41 59 IPR006015 -
Bial16g02634 236 MobiDBLite consensus disorder prediction 210 236 - -
Bial16g02634 236 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 42 201 - -
Bial16g02634 236 MobiDBLite consensus disorder prediction 23 39 - -
Bial16g02634 236 Pfam Universal stress protein family 42 198 IPR006016 -
Bial16g02634 236 Gene3D HUPs 35 210 IPR014729 -
Bial16g02634 236 PANTHER OS01G0783500 PROTEIN 11 226 IPR044162 -
Bial16g02634 236 MobiDBLite consensus disorder prediction 1 39 - -
Bial16g02634 236 CDD USP-Like 43 197 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02634 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189279 Bial4g03236 Bial16g02634
363294 Bial12g02300 Bial16g02634
368929 Bial16g02634 Bial24g02159
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:68235825 Bial2g01790 Bial-Chr2:31615218 dispersed
Bial Bial-Chr12:53328274 Bial16g02634 Bial-Chr16:68235825 wgd
Bial Bial-Chr16:68235825 Bial24g02159 Bial-Chr24:52183598 wgd
Bial Bial-Chr16:68235825 Bial4g03236 Bial-Chr4:74167318 wgd