Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bial16g02638 | ATGTCTATTTCCGATCAAAACCGTTCAACTTCCGACGGAAAACAGCGGCGGTTGTTTCCGTTTTGGCAAACTGGAACCGGTTCTTCGTCGCCGGCGTCAACGCAGAGTCAACTGACGGCGAATAGTAATGAAAACGGCGTCGTATTGAACGGCCGGACGACGAATAAGCTGTCGTCGGTGGCGAAATCGCTTATTCCGGCGAGACGACGGCTCCGGCTTGATCCGGCGAATAATCTATACTTTCCGTATGAGCCTGGTAAACAGGTGAGGAGTGCTGTTCGGATTAAGAACCGTAGCAATTCTCATGTTGCTTTCAAGTTTCAAACGACTGCGCCTAAGAGCTGTTATATGCGACCTCCTGGTGGTGTTTTGGCTCCTGGCGAAAGCCTCATTGCTACAGTTTTCAAGTTTGTTGAGCTACCAGATAAGAACGAAAAACAGTCGGATCAAAGAAGCAAGGTGAAGTTTAAGATCATGAGCCTCAAGGTGAAAGAAGGAACAGACTTTGTGCCTGAACTGTTTGATGAGCAAAAGGATGAAGTAGTTGTTGAGAGGATTTTAAAAGTTACTTTCTTAAATGCGGATCGTTCTACCCCGGCATTGGAAAAACTTAAACATCAACTTGCTGAAGCAGAAGCTGAATTAGAAATAAGGAAAAAGCCTCCTGTGGATACTGGCCCAAAAGTAGTGGGGCAAGGACTTGTTATTGATGAGTGGAAAGAACGAAGGGAGAAATACCTGGCTAGACAACAGGTGGAGGCTACAATGGAAATAGTGGAGAAGAAGAATAACAAGATACAATTGTTGCTTCATACTGGAGGCCTATGGAAGGATAAGTGTACAATGCATTTGAGGTATGAGGGAAACAAGGTAAGAACATATCCGCTAGAGATCCCTTCGGACTTAAACTCGTTTTCGGTGTTGATGGATATTGTGATGAGGGCAGCAGGCTTAGGTGATGATGATTATGTTGGAAAACTAACTTACAGATCAGGACGTATTTGCTTGGCTTTTGGGGCAAGGCCAGGGGATCCACCGGCCGAAACAGGCTATGCACCGATACTTCTCGCCCGAGACATTCACGTTGTCAACTACATGATGAGTATGAAAAGCCGACCCGATCTTAGTCATGACTTATATCTCGAGAAACTTTATTAG | 1158 | 45.34 | MSISDQNRSTSDGKQRRLFPFWQTGTGSSSPASTQSQLTANSNENGVVLNGRTTNKLSSVAKSLIPARRRLRLDPANNLYFPYEPGKQVRSAVRIKNRSNSHVAFKFQTTAPKSCYMRPPGGVLAPGESLIATVFKFVELPDKNEKQSDQRSKVKFKIMSLKVKEGTDFVPELFDEQKDEVVVERILKVTFLNADRSTPALEKLKHQLAEAEAELEIRKKPPVDTGPKVVGQGLVIDEWKERREKYLARQQVEATMEIVEKKNNKIQLLLHTGGLWKDKCTMHLRYEGNKVRTYPLEIPSDLNSFSVLMDIVMRAAGLGDDDYVGKLTYRSGRICLAFGARPGDPPAETGYAPILLARDIHVVNYMMSMKSRPDLSHDLYLEKLY | 385 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bial16g02638 | 385 | SUPERFAMILY | PapD-like | 59 | 199 | IPR008962 | - | |
| Bial16g02638 | 385 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Bial16g02638 | 385 | PANTHER | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN | 70 | 312 | IPR016763 | GO:0005789(InterPro)|GO:0005789(PANTHER)|GO:0005886(PANTHER)|GO:0061817(PANTHER)|GO:0090158(PANTHER) | |
| Bial16g02638 | 385 | Gene3D | Immunoglobulins | 66 | 194 | IPR013783 | - | |
| Bial16g02638 | 385 | Pfam | MSP (Major sperm protein) domain | 71 | 178 | IPR000535 | - | |
| Bial16g02638 | 385 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 70 | 192 | IPR000535 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bial16g02638 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 189283 | Bial4g03240 | Bial16g02638 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Bial | Bial-Chr16:954742 | Bial16g02638 | Bial-Chr16:68328028 | dispersed | |
| Bial | Bial-Chr16:68328028 | Bial9g01915 | Bial-Chr9:51830938 | dispersed | |
| Bial | Bial-Chr16:68328028 | Bial4g03240 | Bial-Chr4:74211895 | wgd | |
| Bial | Bial-Chr16:68328028 | Bial4g00109 | Bial-Chr4:1064215 | wgd |