AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bial16g02641 ATGAGGCACTTGTCTCTTAAACTCGCCCTTGTTTCCGCCAGCGTCGTATCCACCGCTGTCCTGATCAACCTCTTACAACCCATCATTATGAACCTCACAATATCTGACCTCCCTATAATATATACTACCTTTATATCTTGGCTAAAACCACCTTATCTTTACGTTGTTATTAATTGTATTATTATTACCATCGTTGCTTCTTCAAGGTTACAAACCAAGGGTGACGGATTCCACGACCCGCTCTCGACGTACCCTGTACCGGTTCATGAACTGGTCAATGAACCGGTCAAGAACGTTGAAACACCACCGGTTCATGAACTGGTCAATGAACCGGTGGATATTGAGATTGATGGGTTTGTCGGTGAGACGAAGTTTGTTGGTGAAGTGTTGGATGATGATATGAAGATAGCTAAGGAAGCTTATGAAGAGATTAAGAGAGAGAGGGTTAATAAATCGGTTATTTCGATGTCGGCGTGGACACCTTCGGAGGTGAATCAAGTTGGCTTGGTTTCTTCAGTGGAGAAACCGGCAGCTTCTACGCGATTTAGCAGCCGGAAAACGGCGAAAGCCGTTCCCGAAGTCGGTAAAGCATTGGGAGTTGCAAAACCAAAGCGTCAAGACACGCTGGAGACCACGTGGAAGACAATAACCGAGGGTCGCTCAGTTCCGTTAACCAGACACCTACGTAAATCCGACACGTGGGAGACCCGTGAAACTCGTACCTCAGATAATTTCTTAATTAATAATAATAATAATAATAATAATAATAATAATAATAATAGTAATGATATTCACTTAATGAAAAAATCAGAAACGTTTGATGTCAACCGAAGCCGAAAACCGGTTAAACCGCCTGCGCCACAGTCGAAACTGAACCGGACGGGTGGGTTAAAGAAGGAACCGTCGTTGGGACAAGAGGAGTTGAACCGGAGAGTTGAGGCGTTTATTAAGAAGTTTAATGAGGATATGAGGTTACAAAGACAAGAGTCGTTGAATCAGTATATGGAGATGATTAATCGCGGGGCTCATTAA 1032 43.41 MRHLSLKLALVSASVVSTAVLINLLQPIIMNLTISDLPIIYTTFISWLKPPYLYVVINCIIITIVASSRLQTKGDGFHDPLSTYPVPVHELVNEPVKNVETPPVHELVNEPVDIEIDGFVGETKFVGEVLDDDMKIAKEAYEEIKRERVNKSVISMSAWTPSEVNQVGLVSSVEKPAASTRFSSRKTAKAVPEVGKALGVAKPKRQDTLETTWKTITEGRSVPLTRHLRKSDTWETRETRTSDNFLINNNNNNNNNNNNNSNDIHLMKKSETFDVNRSRKPVKPPAPQSKLNRTGGLKKEPSLGQEELNRRVEAFIKKFNEDMRLQRQESLNQYMEMINRGAH 343
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bial16g02641 343 MobiDBLite consensus disorder prediction 244 305 - -
Bial16g02641 343 Pfam Cotton fibre expressed protein 305 340 IPR008480 -
Bial16g02641 343 Pfam Domain of unknown function (DUF4408) 38 70 IPR025520 -
Bial16g02641 343 PANTHER COTTON FIBER (DUF761) 7 341 - -
Bial16g02641 343 MobiDBLite consensus disorder prediction 244 266 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bial16g02641 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
189286 Bial4g03245 Bial16g02641
363301 Bial12g02304 Bial16g02641
368931 Bial16g02641 Bial24g02163
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Bial Bial-Chr16:68347628 Bial18g01223 Bial-Chr18:20443671 dispersed
Bial Bial-Chr12:53345272 Bial16g02641 Bial-Chr16:68347628 wgd
Bial Bial-Chr16:68347628 Bial24g02163 Bial-Chr24:52200724 wgd
Bial Bial-Chr16:68347628 Bial4g03245 Bial-Chr4:74273561 wgd